Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 IPO8P1-201ENST00000455509 3109 ntBASIC4.91□□□□□ -1.62
MSH6P52701 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
MSH6P52701 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
MSH6P52701 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
MSH6P52701 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
MSH6P52701 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.91□□□□□ -1.62
MSH6P52701 LINC01355-201ENST00000566551 5444 ntBASIC4.91□□□□□ -1.62
MSH6P52701 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.91□□□□□ -1.62
MSH6P52701 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.91□□□□□ -1.62
MSH6P52701 AC244033.1-201ENST00000426826 870 ntBASIC4.91□□□□□ -1.62
MSH6P52701 HIGD1AP12-201ENST00000427832 281 ntBASIC4.91□□□□□ -1.62
MSH6P52701 AL158071.1-201ENST00000430315 461 ntBASIC4.91□□□□□ -1.62
MSH6P52701 NPM1P48-201ENST00000436002 853 ntBASIC4.91□□□□□ -1.62
MSH6P52701 VN1R96P-201ENST00000446052 858 ntBASIC4.91□□□□□ -1.62
MSH6P52701 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.91□□□□□ -1.62
MSH6P52701 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.91□□□□□ -1.62
MSH6P52701 RPS3AP43-201ENST00000479743 781 ntBASIC4.91□□□□□ -1.62
MSH6P52701 UBA52P3-201ENST00000491303 382 ntBASIC4.91□□□□□ -1.62
MSH6P52701 AC110794.1-201ENST00000505816 425 ntBASIC4.91□□□□□ -1.62
MSH6P52701 AC113430.1-201ENST00000506872 718 ntBASIC4.91□□□□□ -1.62
MSH6P52701 PTGES3P3-201ENST00000511479 482 ntBASIC4.91□□□□□ -1.62
MSH6P52701 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
MSH6P52701 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.91□□□□□ -1.62
MSH6P52701 AC027281.1-201ENST00000574178 758 ntBASIC4.91□□□□□ -1.62
MSH6P52701 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.91□□□□□ -1.62
MSH6P52701 AL133247.2-201ENST00000603236 482 ntBASIC4.91□□□□□ -1.62
MSH6P52701 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.91□□□□□ -1.62
MSH6P52701 AC026422.1-201ENST00000623961 452 ntBASIC4.91□□□□□ -1.62
MSH6P52701 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.91□□□□□ -1.62
MSH6P52701 NEAT1-202ENST00000501122 22743 ntBASIC4.9□□□□□ -1.62
MSH6P52701 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
MSH6P52701 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
MSH6P52701 Z83843.1-201ENST00000604070 3685 ntBASIC4.9□□□□□ -1.63
MSH6P52701 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
MSH6P52701 RNU1-140P-201ENST00000365040 165 ntBASIC4.9□□□□□ -1.63
MSH6P52701 AL357075.1-201ENST00000404107 726 ntBASIC4.9□□□□□ -1.63
MSH6P52701 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.9□□□□□ -1.63
MSH6P52701 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.9□□□□□ -1.63
MSH6P52701 AC096638.2-201ENST00000434965 711 ntBASIC4.9□□□□□ -1.63
MSH6P52701 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.9□□□□□ -1.63
MSH6P52701 RN7SKP5-201ENST00000517045 272 ntBASIC4.9□□□□□ -1.63
MSH6P52701 AC004024.1-201ENST00000549244 247 ntBASIC4.9□□□□□ -1.63
MSH6P52701 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.9□□□□□ -1.63
MSH6P52701 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.9□□□□□ -1.63
MSH6P52701 AL137246.1-201ENST00000607072 977 ntBASIC4.9□□□□□ -1.63
MSH6P52701 AC084036.1-201ENST00000609190 508 ntBASIC4.9□□□□□ -1.63
MSH6P52701 AC013412.1-201ENST00000610687 192 ntBASIC4.9□□□□□ -1.63
MSH6P52701 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
MSH6P52701 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.9□□□□□ -1.63
MSH6P52701 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.89□□□□□ -1.63
MSH6P52701 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.89□□□□□ -1.63
MSH6P52701 CDC27P2-201ENST00000425026 1922 ntBASIC4.89□□□□□ -1.63
MSH6P52701 SNORA5B-201ENST00000363786 132 ntBASIC4.89□□□□□ -1.63
MSH6P52701 RNA5SP80-201ENST00000410475 111 ntBASIC4.89□□□□□ -1.63
MSH6P52701 HMGB3P20-201ENST00000417997 600 ntBASIC4.89□□□□□ -1.63
MSH6P52701 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.89□□□□□ -1.63
MSH6P52701 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
MSH6P52701 AC107083.1-201ENST00000439643 279 ntBASIC4.89□□□□□ -1.63
MSH6P52701 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.89□□□□□ -1.63
MSH6P52701 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.89□□□□□ -1.63
MSH6P52701 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.89□□□□□ -1.63
MSH6P52701 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.89□□□□□ -1.63
MSH6P52701 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.89□□□□□ -1.63
MSH6P52701 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.89□□□□□ -1.63
MSH6P52701 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.89□□□□□ -1.63
MSH6P52701 AP000859.1-201ENST00000525536 307 ntBASIC4.89□□□□□ -1.63
MSH6P52701 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.89□□□□□ -1.63
MSH6P52701 AL121766.1-201ENST00000547436 487 ntBASIC4.89□□□□□ -1.63
MSH6P52701 AC023161.2-201ENST00000551218 780 ntBASIC4.89□□□□□ -1.63
MSH6P52701 AL732618.1-201ENST00000623251 301 ntBASIC4.89□□□□□ -1.63
MSH6P52701 BMS1P21-201ENST00000634565 365 ntBASIC4.89□□□□□ -1.63
MSH6P52701 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
MSH6P52701 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
MSH6P52701 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
MSH6P52701 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
MSH6P52701 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
MSH6P52701 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
MSH6P52701 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
MSH6P52701 LAP3P1-201ENST00000403648 294 ntBASIC4.88□□□□□ -1.63
MSH6P52701 AL136131.1-201ENST00000406079 803 ntBASIC4.88□□□□□ -1.63
MSH6P52701 JKAMPP1-201ENST00000413804 919 ntBASIC4.88□□□□□ -1.63
MSH6P52701 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.88□□□□□ -1.63
MSH6P52701 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.88□□□□□ -1.63
MSH6P52701 AC233982.1-201ENST00000451247 436 ntBASIC4.88□□□□□ -1.63
MSH6P52701 AC097262.1-201ENST00000452559 548 ntBASIC4.88□□□□□ -1.63
MSH6P52701 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.88□□□□□ -1.63
MSH6P52701 RPS26P15-201ENST00000488067 348 ntBASIC4.88□□□□□ -1.63
MSH6P52701 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.88□□□□□ -1.63
MSH6P52701 RPL12P22-201ENST00000519073 490 ntBASIC4.88□□□□□ -1.63
MSH6P52701 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.88□□□□□ -1.63
MSH6P52701 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.88□□□□□ -1.63
MSH6P52701 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.88□□□□□ -1.63
MSH6P52701 TRAV15-201ENST00000556680 249 ntBASIC4.88□□□□□ -1.63
MSH6P52701 SULT1C2P2-201ENST00000562517 294 ntBASIC4.88□□□□□ -1.63
MSH6P52701 AC093732.2-201ENST00000607950 274 ntBASIC4.88□□□□□ -1.63
MSH6P52701 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.88□□□□□ -1.63
MSH6P52701 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.88□□□□□ -1.63
MSH6P52701 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.88□□□□□ -1.63
MSH6P52701 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
MSH6P52701 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms