Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.49□□□□□ -1.85
GTF2A1P52655 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.49□□□□□ -1.85
GTF2A1P52655 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.49□□□□□ -1.85
GTF2A1P52655 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
GTF2A1P52655 AC022149.2-201ENST00000621061 203 ntBASIC3.49□□□□□ -1.85
GTF2A1P52655 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
GTF2A1P52655 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
GTF2A1P52655 AC092435.3-201ENST00000565538 3654 ntBASIC3.49□□□□□ -1.85
GTF2A1P52655 AC068647.1-201ENST00000489539 2265 ntBASIC3.49□□□□□ -1.85
GTF2A1P52655 AC107081.3-201ENST00000612715 2034 ntBASIC3.48□□□□□ -1.85
GTF2A1P52655 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
GTF2A1P52655 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.48□□□□□ -1.85
GTF2A1P52655 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
GTF2A1P52655 SNORA60-201ENST00000362396 134 ntBASIC3.48□□□□□ -1.85
GTF2A1P52655 RNA5SP399-201ENST00000364003 117 ntBASIC3.48□□□□□ -1.85
GTF2A1P52655 RNVU1-6-201ENST00000364688 164 ntBASIC3.48□□□□□ -1.85
GTF2A1P52655 RNA5SP505-201ENST00000364748 108 ntBASIC3.48□□□□□ -1.85
GTF2A1P52655 RPS16P5-201ENST00000406501 404 ntBASIC3.48□□□□□ -1.85
GTF2A1P52655 MTND4LP21-201ENST00000415303 295 ntBASIC3.48□□□□□ -1.85
GTF2A1P52655 NDUFB1P1-201ENST00000435191 180 ntBASIC3.48□□□□□ -1.85
GTF2A1P52655 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.48□□□□□ -1.85
GTF2A1P52655 AL662791.1-201ENST00000441992 928 ntBASIC3.48□□□□□ -1.85
GTF2A1P52655 RANP8-201ENST00000444720 713 ntBASIC3.48□□□□□ -1.85
GTF2A1P52655 AC009963.2-201ENST00000453431 138 ntBASIC3.48□□□□□ -1.85
GTF2A1P52655 OR2AF1P-201ENST00000454899 889 ntBASIC3.48□□□□□ -1.85
GTF2A1P52655 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
GTF2A1P52655 TRBV8-1-201ENST00000481590 279 ntBASIC3.48□□□□□ -1.85
GTF2A1P52655 AC041039.1-201ENST00000485656 536 ntBASIC3.48□□□□□ -1.85
GTF2A1P52655 AP000563.1-201ENST00000490865 758 ntBASIC3.48□□□□□ -1.85
GTF2A1P52655 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.48□□□□□ -1.85
GTF2A1P52655 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.48□□□□□ -1.85
GTF2A1P52655 IGBP1P5-201ENST00000507524 1000 ntBASIC3.48□□□□□ -1.85
GTF2A1P52655 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.48□□□□□ -1.85
GTF2A1P52655 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.48□□□□□ -1.85
GTF2A1P52655 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC3.48□□□□□ -1.85
GTF2A1P52655 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.48□□□□□ -1.85
GTF2A1P52655 AC006116.7-201ENST00000590141 756 ntBASIC3.48□□□□□ -1.85
GTF2A1P52655 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.48□□□□□ -1.85
GTF2A1P52655 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.48□□□□□ -1.85
GTF2A1P52655 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.48□□□□□ -1.85
GTF2A1P52655 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.48□□□□□ -1.85
GTF2A1P52655 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
GTF2A1P52655 AC092447.7-201ENST00000422212 1621 ntBASIC3.48□□□□□ -1.85
GTF2A1P52655 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.47□□□□□ -1.85
GTF2A1P52655 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
GTF2A1P52655 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
GTF2A1P52655 AC011978.2-201ENST00000569835 2054 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
GTF2A1P52655 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
GTF2A1P52655 U3.6-201ENST00000363622 211 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 RNA5SP447-201ENST00000363749 119 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
GTF2A1P52655 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
GTF2A1P52655 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
GTF2A1P52655 RPS3AP23-201ENST00000401762 784 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 RNU4-25P-201ENST00000410569 230 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.47□□□□□ -1.85
GTF2A1P52655 HSPE1P12-201ENST00000412576 301 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 AC011933.1-201ENST00000413334 321 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
GTF2A1P52655 RPL21P40-201ENST00000428586 483 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 RPL39P40-201ENST00000445481 146 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.47□□□□□ -1.85
GTF2A1P52655 OR9M1P-201ENST00000459641 921 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 RPL35AP28-201ENST00000459730 331 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 AC116533.1-201ENST00000459748 321 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.47□□□□□ -1.85
GTF2A1P52655 AC008638.1-201ENST00000506035 866 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
GTF2A1P52655 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.47□□□□□ -1.85
GTF2A1P52655 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.47□□□□□ -1.85
GTF2A1P52655 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
GTF2A1P52655 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.47□□□□□ -1.85
GTF2A1P52655 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.47□□□□□ -1.85
GTF2A1P52655 SETP2-201ENST00000553886 926 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.47□□□□□ -1.85
GTF2A1P52655 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.47□□□□□ -1.85
GTF2A1P52655 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.47□□□□□ -1.85
GTF2A1P52655 MIR4715-201ENST00000584117 79 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 AC211433.2-201ENST00000608433 387 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 AC069234.5-201ENST00000611056 416 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 AL359198.2-201ENST00000611836 194 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 AL049539.1-201ENST00000611964 459 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 AC090617.7-201ENST00000623952 126 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 AL732372.2-225ENST00000642124 456 ntBASIC3.47□□□□□ -1.85
GTF2A1P52655 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.47□□□□□ -1.85
GTF2A1P52655 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
GTF2A1P52655 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
GTF2A1P52655 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.46□□□□□ -1.86
GTF2A1P52655 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
GTF2A1P52655 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
GTF2A1P52655 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
GTF2A1P52655 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
GTF2A1P52655 AL357075.1-201ENST00000404107 726 ntBASIC3.46□□□□□ -1.86
GTF2A1P52655 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
GTF2A1P52655 OR5BE1P-201ENST00000425977 939 ntBASIC3.46□□□□□ -1.86
GTF2A1P52655 RPS27AP12-201ENST00000429552 465 ntBASIC3.46□□□□□ -1.86
GTF2A1P52655 HIGD1AP4-201ENST00000430194 280 ntBASIC3.46□□□□□ -1.86
GTF2A1P52655 BTF3P10-201ENST00000433415 495 ntBASIC3.46□□□□□ -1.86
GTF2A1P52655 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms