Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AP005137.2-201ENST00000609238 400 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 AL121873.1-201ENST00000616013 524 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 AP003485.2-201ENST00000623636 610 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCNKAP51800 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
CLCNKAP51800 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
CLCNKAP51800 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLCNKAP51800 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CLCNKAP51800 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.39□□□□□ -1.71
CLCNKAP51800 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCNKAP51800 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.38□□□□□ -1.71
CLCNKAP51800 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
CLCNKAP51800 AC139769.1-204ENST00000472297 1931 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CLCNKAP51800 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
CLCNKAP51800 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLCNKAP51800 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.38□□□□□ -1.71
CLCNKAP51800 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.38□□□□□ -1.71
CLCNKAP51800 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLCNKAP51800 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLCNKAP51800 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCNKAP51800 SNORA62-201ENST00000365493 153 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CLCNKAP51800 RNU6-1279P-201ENST00000383917 103 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 MIR3065-201ENST00000390137 79 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 MTCO2P31-201ENST00000402702 684 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCNKAP51800 AL008987.1-201ENST00000415528 237 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCNKAP51800 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCNKAP51800 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.38□□□□□ -1.71
CLCNKAP51800 ELOCP9-201ENST00000418624 239 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 RPF2P1-201ENST00000424137 906 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 HIGD1AP4-201ENST00000430194 280 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.38□□□□□ -1.71
CLCNKAP51800 RPS7P5-201ENST00000441482 581 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.38□□□□□ -1.71
CLCNKAP51800 AC005008.1-201ENST00000456151 612 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 RPL23AP24-201ENST00000458203 385 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 RPS27AP17-201ENST00000463344 455 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 NDUFA5P9-201ENST00000472609 340 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 AC004263.1-201ENST00000479327 332 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.38□□□□□ -1.71
CLCNKAP51800 AC083829.1-201ENST00000503756 657 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 IGBP1P5-201ENST00000507524 1000 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 STMN1P2-201ENST00000508435 439 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 RNA5SP446-201ENST00000515955 82 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 IGKV2-36-201ENST00000519999 223 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.38□□□□□ -1.71
CLCNKAP51800 AC010306.1-201ENST00000523223 1117 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCNKAP51800 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCNKAP51800 MRPS36P5-201ENST00000551909 298 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLCNKAP51800 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCNKAP51800 MTND4LP24-201ENST00000572277 291 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLCNKAP51800 NF1P5-201ENST00000588287 448 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.38□□□□□ -1.71
CLCNKAP51800 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCNKAP51800 AC103792.1-201ENST00000603591 919 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 AC115621.1-201ENST00000604653 858 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 AL139344.1-201ENST00000605228 195 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 AL158196.1-201ENST00000616786 434 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 AP002782.1-201ENST00000623107 614 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 MTND4P31-201ENST00000425607 1343 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.38□□□□□ -1.71
CLCNKAP51800 NXPH1-205ENST00000602349 1953 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 AC068254.2-201ENST00000623938 3577 ntBASIC4.38□□□□□ -1.71
CLCNKAP51800 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
CLCNKAP51800 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CLCNKAP51800 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLCNKAP51800 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.37□□□□□ -1.71
CLCNKAP51800 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CLCNKAP51800 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLCNKAP51800 AC007529.1-201ENST00000418574 2178 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.37□□□□□ -1.71
CLCNKAP51800 AC090229.1-201ENST00000590983 1609 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLCNKAP51800 AC126755.2-208ENST00000327792 462 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 AC138969.1-213ENST00000331436 462 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLCNKAP51800 snoZ40.1-201ENST00000364540 72 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 RNA5SP509-201ENST00000364577 119 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLCNKAP51800 SNORD96B-201ENST00000386148 79 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 ERHP2-201ENST00000402323 299 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 VDAC1P9-201ENST00000412766 841 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 RPS29P17-201ENST00000430795 166 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.37□□□□□ -1.71
CLCNKAP51800 AC011998.1-201ENST00000433403 117 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.37□□□□□ -1.71
CLCNKAP51800 UBE2V1P5-201ENST00000440070 405 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 AC114495.1-201ENST00000441274 436 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 MRPL42P4-201ENST00000453267 443 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 BX248409.1-201ENST00000455497 255 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 RN7SL98P-201ENST00000462271 300 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 RPS23P7-201ENST00000466210 444 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms