Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.46□□□□□ -1.86
CX3CR1P49238 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.46□□□□□ -1.86
CX3CR1P49238 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.46□□□□□ -1.86
CX3CR1P49238 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.46□□□□□ -1.86
CX3CR1P49238 RN7SL600P-201ENST00000581811 299 ntBASIC3.46□□□□□ -1.86
CX3CR1P49238 KPNA2P3-201ENST00000584190 848 ntBASIC3.46□□□□□ -1.86
CX3CR1P49238 EIF1P6-201ENST00000600054 334 ntBASIC3.46□□□□□ -1.86
CX3CR1P49238 AC004775.1-201ENST00000607389 753 ntBASIC3.46□□□□□ -1.86
CX3CR1P49238 AC112503.1-201ENST00000608436 391 ntBASIC3.46□□□□□ -1.86
CX3CR1P49238 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.46□□□□□ -1.86
CX3CR1P49238 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.46□□□□□ -1.86
CX3CR1P49238 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.46□□□□□ -1.86
CX3CR1P49238 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.46□□□□□ -1.86
CX3CR1P49238 MIR7641-1-201ENST00000627518 61 ntBASIC3.46□□□□□ -1.86
CX3CR1P49238 FAM157B-203ENST00000639350 358 ntBASIC3.46□□□□□ -1.86
CX3CR1P49238 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CX3CR1P49238 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CX3CR1P49238 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CX3CR1P49238 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CX3CR1P49238 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CX3CR1P49238 RPS4XP5-202ENST00000449995 1334 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CX3CR1P49238 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CX3CR1P49238 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.45□□□□□ -1.86
CX3CR1P49238 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
CX3CR1P49238 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CX3CR1P49238 RNU6-252P-201ENST00000363232 107 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 RNA5SP399-201ENST00000364003 117 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 RNU6-883P-201ENST00000384597 107 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CX3CR1P49238 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.45□□□□□ -1.86
CX3CR1P49238 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.45□□□□□ -1.86
CX3CR1P49238 RANP8-201ENST00000444720 713 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 AL500522.2-201ENST00000448562 343 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 BX276092.4-201ENST00000452056 248 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 TVP23BP2-201ENST00000455082 615 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 MTND2P6-201ENST00000455337 1030 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.45□□□□□ -1.86
CX3CR1P49238 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.45□□□□□ -1.86
CX3CR1P49238 AC146507.1-201ENST00000468335 354 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.45□□□□□ -1.86
CX3CR1P49238 AC126121.1-201ENST00000482313 553 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 AC073522.1-201ENST00000483312 377 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 AC106872.2-201ENST00000494303 480 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.45□□□□□ -1.86
CX3CR1P49238 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CX3CR1P49238 SNORA31.9-201ENST00000516429 84 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 MRPL49P2-201ENST00000521066 465 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 C1GALT1P3-201ENST00000522049 819 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.45□□□□□ -1.86
CX3CR1P49238 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.45□□□□□ -1.86
CX3CR1P49238 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.45□□□□□ -1.86
CX3CR1P49238 AC074029.1-201ENST00000552531 1044 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 AC025918.2-201ENST00000558683 763 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CX3CR1P49238 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.45□□□□□ -1.86
CX3CR1P49238 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.45□□□□□ -1.86
CX3CR1P49238 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.45□□□□□ -1.86
CX3CR1P49238 MIR4496-201ENST00000635896 61 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CX3CR1P49238 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.45□□□□□ -1.86
CX3CR1P49238 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CX3CR1P49238 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CX3CR1P49238 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CX3CR1P49238 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.45□□□□□ -1.86
CX3CR1P49238 XPOTP1-201ENST00000443317 2398 ntBASIC3.45□□□□□ -1.86
CX3CR1P49238 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CX3CR1P49238 HSPA8P1-201ENST00000425843 1833 ntBASIC3.44□□□□□ -1.86
CX3CR1P49238 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
CX3CR1P49238 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
CX3CR1P49238 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.44□□□□□ -1.86
CX3CR1P49238 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.44□□□□□ -1.86
CX3CR1P49238 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CX3CR1P49238 AP002001.2-201ENST00000529025 1469 ntBASIC3.44□□□□□ -1.86
CX3CR1P49238 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.44□□□□□ -1.86
CX3CR1P49238 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CX3CR1P49238 AL356057.1-202ENST00000402263 756 ntBASIC3.44□□□□□ -1.86
CX3CR1P49238 PRRC2CP1-201ENST00000404428 159 ntBASIC3.44□□□□□ -1.86
CX3CR1P49238 BTBD10P2-201ENST00000404779 676 ntBASIC3.44□□□□□ -1.86
CX3CR1P49238 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.44□□□□□ -1.86
CX3CR1P49238 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.44□□□□□ -1.86
CX3CR1P49238 AC241520.1-201ENST00000422654 1099 ntBASIC3.44□□□□□ -1.86
CX3CR1P49238 AL691449.1-201ENST00000426570 421 ntBASIC3.44□□□□□ -1.86
CX3CR1P49238 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.44□□□□□ -1.86
CX3CR1P49238 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.44□□□□□ -1.86
CX3CR1P49238 AC083863.1-201ENST00000438811 231 ntBASIC3.44□□□□□ -1.86
CX3CR1P49238 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.44□□□□□ -1.86
CX3CR1P49238 AC009263.1-201ENST00000441193 1239 ntBASIC3.44□□□□□ -1.86
CX3CR1P49238 RPL23AP33-201ENST00000442301 452 ntBASIC3.44□□□□□ -1.86
CX3CR1P49238 AC068135.1-201ENST00000446164 246 ntBASIC3.44□□□□□ -1.86
CX3CR1P49238 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.44□□□□□ -1.86
CX3CR1P49238 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CX3CR1P49238 RPL7P24-201ENST00000493052 752 ntBASIC3.44□□□□□ -1.86
CX3CR1P49238 RPL5P23-201ENST00000496040 868 ntBASIC3.44□□□□□ -1.86
CX3CR1P49238 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.44□□□□□ -1.86
CX3CR1P49238 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.44□□□□□ -1.86
CX3CR1P49238 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.44□□□□□ -1.86
CX3CR1P49238 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.44□□□□□ -1.86
CX3CR1P49238 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.44□□□□□ -1.86
CX3CR1P49238 AC138701.1-201ENST00000524329 714 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms