Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC006967.1-201ENST00000467608 589 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 COPS8P2-201ENST00000473228 627 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 AC087385.1-201ENST00000475062 312 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 RPL21P103-201ENST00000479921 488 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 UBA52P7-201ENST00000486088 380 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX2-1P43699 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-1P43699 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NKX2-1P43699 MTND1P22-201ENST00000510572 951 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-1P43699 RNU6-1225P-201ENST00000516336 65 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 RN7SKP234-201ENST00000517173 224 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-1P43699 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.8□□□□□ -1.8
NKX2-1P43699 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
NKX2-1P43699 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX2-1P43699 ZNF321P-202ENST00000550843 495 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-1P43699 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-1P43699 CENPUP2-201ENST00000555897 1186 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX2-1P43699 MTND3P12-201ENST00000559068 328 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-1P43699 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX2-1P43699 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-1P43699 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
NKX2-1P43699 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX2-1P43699 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX2-1P43699 AC007566.2-201ENST00000603642 413 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 AP003117.2-201ENST00000606010 545 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 TUSC7.1-201ENST00000610969 165 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX2-1P43699 AC022079.1-201ENST00000621546 602 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 AP002505.2-201ENST00000623585 696 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 MIR4278-201ENST00000636094 69 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX2-1P43699 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NKX2-1P43699 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
NKX2-1P43699 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
NKX2-1P43699 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NKX2-1P43699 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.79□□□□□ -1.8
NKX2-1P43699 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
NKX2-1P43699 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NKX2-1P43699 ZFRP1-201ENST00000457579 2970 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.79□□□□□ -1.8
NKX2-1P43699 AC026951.1-201ENST00000559530 2459 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NKX2-1P43699 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
NKX2-1P43699 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NKX2-1P43699 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NKX2-1P43699 OR4A15-201ENST00000314706 1035 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 U3.2-201ENST00000362981 210 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 RNU1-85P-201ENST00000364127 164 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 RNA5SP428-201ENST00000365129 132 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 RNU6-157P-201ENST00000383957 107 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 Y_RNA.465-201ENST00000384293 102 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 SSXP10-201ENST00000402595 565 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 MTND4P22-201ENST00000413116 1169 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 LUZP4P1-201ENST00000415420 344 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 AC092634.6-201ENST00000418558 192 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 MFSD13B-201ENST00000420133 1290 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 GTF2IP23-201ENST00000423746 351 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX2-1P43699 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX2-1P43699 SKP1P3-201ENST00000429280 487 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.79□□□□□ -1.8
NKX2-1P43699 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.79□□□□□ -1.8
NKX2-1P43699 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.79□□□□□ -1.8
NKX2-1P43699 FAR2P1-206ENST00000449736 709 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 PPIAP20-201ENST00000449839 135 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.79□□□□□ -1.8
NKX2-1P43699 ANKRD26P4-201ENST00000455755 950 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.79□□□□□ -1.8
NKX2-1P43699 AC146507.1-201ENST00000468335 354 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.79□□□□□ -1.8
NKX2-1P43699 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX2-1P43699 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.79□□□□□ -1.8
NKX2-1P43699 AC090013.1-201ENST00000485147 480 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 AC008897.1-201ENST00000494006 347 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX2-1P43699 SNRPCP2-201ENST00000504370 475 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX2-1P43699 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX2-1P43699 MTCO1P30-201ENST00000515244 580 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 FABP5P12-201ENST00000515543 389 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 RNU6-1129P-201ENST00000515964 104 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 RNU6-1261P-201ENST00000517194 104 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 IGLV3-26-201ENST00000520756 302 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX2-1P43699 OR5AZ1P-201ENST00000527448 943 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NKX2-1P43699 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX2-1P43699 AC022832.1-201ENST00000530718 645 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 OR4A12P-201ENST00000530847 918 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.79□□□□□ -1.8
NKX2-1P43699 PDCL2P2-201ENST00000533651 189 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 AC005832.3-201ENST00000537929 631 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NKX2-1P43699 LSM6P2-201ENST00000552208 177 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms