Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AL121834.1-201ENST00000572284 509 ntBASIC4.54□□□□□ -1.68
HADHAP40939 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.54□□□□□ -1.68
HADHAP40939 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.54□□□□□ -1.68
HADHAP40939 RPP40P2-201ENST00000603596 712 ntBASIC4.54□□□□□ -1.68
HADHAP40939 AP003973.1-201ENST00000604639 691 ntBASIC4.54□□□□□ -1.68
HADHAP40939 AC067931.1-201ENST00000624190 671 ntBASIC4.54□□□□□ -1.68
HADHAP40939 AL512506.2-201ENST00000624472 458 ntBASIC4.54□□□□□ -1.68
HADHAP40939 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HADHAP40939 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HADHAP40939 MFSD8-245ENST00000641743 948 ntBASIC4.54□□□□□ -1.68
HADHAP40939 AC000367.1-201ENST00000452711 1766 ntBASIC4.54□□□□□ -1.68
HADHAP40939 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.54□□□□□ -1.68
HADHAP40939 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.54□□□□□ -1.68
HADHAP40939 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.54□□□□□ -1.68
HADHAP40939 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.54□□□□□ -1.68
HADHAP40939 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
HADHAP40939 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HADHAP40939 DHX40P1-201ENST00000588725 1412 ntBASIC4.54□□□□□ -1.68
HADHAP40939 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HADHAP40939 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HADHAP40939 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
HADHAP40939 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
HADHAP40939 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HADHAP40939 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HADHAP40939 AC068254.2-201ENST00000623938 3577 ntBASIC4.53□□□□□ -1.68
HADHAP40939 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HADHAP40939 AC010300.1-201ENST00000600671 5134 ntBASIC4.53□□□□□ -1.68
HADHAP40939 NXPH1-205ENST00000602349 1953 ntBASIC4.53□□□□□ -1.68
HADHAP40939 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HADHAP40939 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HADHAP40939 CPHL1P-201ENST00000461341 3407 ntBASIC4.53□□□□□ -1.68
HADHAP40939 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HADHAP40939 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HADHAP40939 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HADHAP40939 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HADHAP40939 RNU1-63P-201ENST00000383902 164 ntBASIC4.53□□□□□ -1.68
HADHAP40939 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HADHAP40939 RAB28P1-201ENST00000411517 641 ntBASIC4.53□□□□□ -1.68
HADHAP40939 RPS3AP9-201ENST00000417027 792 ntBASIC4.53□□□□□ -1.68
HADHAP40939 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.53□□□□□ -1.68
HADHAP40939 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.53□□□□□ -1.68
HADHAP40939 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.53□□□□□ -1.68
HADHAP40939 RPS12P10-201ENST00000427031 377 ntBASIC4.53□□□□□ -1.68
HADHAP40939 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.53□□□□□ -1.68
HADHAP40939 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.53□□□□□ -1.68
HADHAP40939 RPS6P12-201ENST00000432491 726 ntBASIC4.53□□□□□ -1.68
HADHAP40939 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.53□□□□□ -1.68
HADHAP40939 RPL23AP93-201ENST00000440847 484 ntBASIC4.53□□□□□ -1.68
HADHAP40939 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.53□□□□□ -1.68
HADHAP40939 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.53□□□□□ -1.68
HADHAP40939 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.53□□□□□ -1.68
HADHAP40939 TRAV31-201ENST00000502780 342 ntBASIC4.53□□□□□ -1.68
HADHAP40939 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.53□□□□□ -1.68
HADHAP40939 RN7SKP92-201ENST00000517266 244 ntBASIC4.53□□□□□ -1.68
HADHAP40939 ARL2BPP5-201ENST00000523141 481 ntBASIC4.53□□□□□ -1.68
HADHAP40939 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.53□□□□□ -1.68
HADHAP40939 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.53□□□□□ -1.68
HADHAP40939 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.53□□□□□ -1.68
HADHAP40939 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.53□□□□□ -1.68
HADHAP40939 MTCYBP28-201ENST00000566728 1132 ntBASIC4.53□□□□□ -1.68
HADHAP40939 AC069061.3-201ENST00000582254 823 ntBASIC4.53□□□□□ -1.68
HADHAP40939 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.53□□□□□ -1.68
HADHAP40939 AL354760.1-201ENST00000608357 643 ntBASIC4.53□□□□□ -1.68
HADHAP40939 AL133243.1-201ENST00000614487 366 ntBASIC4.53□□□□□ -1.68
HADHAP40939 AC010975.3-201ENST00000618727 978 ntBASIC4.53□□□□□ -1.68
HADHAP40939 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.53□□□□□ -1.68
HADHAP40939 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.53□□□□□ -1.68
HADHAP40939 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.53□□□□□ -1.68
HADHAP40939 KPNA2P2-201ENST00000419546 1489 ntBASIC4.53□□□□□ -1.68
HADHAP40939 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HADHAP40939 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HADHAP40939 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HADHAP40939 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.53□□□□□ -1.69
HADHAP40939 MTND5P31-201ENST00000419366 1374 ntBASIC4.53□□□□□ -1.69
HADHAP40939 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.52□□□□□ -1.69
HADHAP40939 AC106754.1-201ENST00000562632 1513 ntBASIC4.52□□□□□ -1.69
HADHAP40939 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HADHAP40939 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HADHAP40939 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.52□□□□□ -1.69
HADHAP40939 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HADHAP40939 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HADHAP40939 RNA5SP307-201ENST00000362863 116 ntBASIC4.52□□□□□ -1.69
HADHAP40939 RNU6-115P-201ENST00000364310 107 ntBASIC4.52□□□□□ -1.69
HADHAP40939 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.52□□□□□ -1.69
HADHAP40939 MTCO3P31-201ENST00000405526 789 ntBASIC4.52□□□□□ -1.69
HADHAP40939 AL139098.1-201ENST00000407291 389 ntBASIC4.52□□□□□ -1.69
HADHAP40939 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.52□□□□□ -1.69
HADHAP40939 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.52□□□□□ -1.69
HADHAP40939 IFNNP1-201ENST00000429219 553 ntBASIC4.52□□□□□ -1.69
HADHAP40939 MTCO1P3-201ENST00000429327 192 ntBASIC4.52□□□□□ -1.69
HADHAP40939 YWHAZP8-201ENST00000436935 731 ntBASIC4.52□□□□□ -1.69
HADHAP40939 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.52□□□□□ -1.69
HADHAP40939 AC004854.1-201ENST00000440356 349 ntBASIC4.52□□□□□ -1.69
HADHAP40939 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.52□□□□□ -1.69
HADHAP40939 AC104306.1-201ENST00000449702 371 ntBASIC4.52□□□□□ -1.69
HADHAP40939 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.52□□□□□ -1.69
HADHAP40939 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HADHAP40939 AC012671.1-201ENST00000451912 203 ntBASIC4.52□□□□□ -1.69
HADHAP40939 CEACAMP6-201ENST00000452007 574 ntBASIC4.52□□□□□ -1.69
HADHAP40939 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms