Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RN7SKP222-201ENST00000410651 315 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 RNA5SP498-201ENST00000411342 120 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGCLP35914 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCLP35914 PNRC2P1-201ENST00000423940 420 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGCLP35914 HSFY7P-201ENST00000432672 318 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCLP35914 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGCLP35914 HSFY8P-201ENST00000437934 318 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCLP35914 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCLP35914 HMGB3P22-202ENST00000451823 572 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 HMGB1P26-201ENST00000452520 628 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 HSFY5P-201ENST00000453726 309 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCLP35914 RNU6-1218P-201ENST00000458990 108 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 RPL21P11-201ENST00000461458 483 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 RPL7P24-201ENST00000493052 752 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGCLP35914 HIGD1AP18-201ENST00000520730 278 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGCLP35914 OR8R1P-201ENST00000543943 764 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 AC008083.2-201ENST00000546707 476 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 AC091515.1-201ENST00000548110 679 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCLP35914 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.93□□□□□ -1.78
HMGCLP35914 AC122134.1-202ENST00000569111 1201 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGCLP35914 AC141257.3-201ENST00000572906 215 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 MIR4644-201ENST00000579929 84 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 SS18L2P2-201ENST00000583960 235 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCLP35914 MRPS35P3-201ENST00000603189 709 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 AC110741.2-201ENST00000605278 268 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 AL591424.2-201ENST00000617023 128 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCLP35914 MIR6500-201ENST00000622700 86 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 AC024023.1-201ENST00000624530 922 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HMGCLP35914 AC106871.1-201ENST00000568324 3102 ntBASIC3.93□□□□□ -1.78
HMGCLP35914 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGCLP35914 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HMGCLP35914 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HMGCLP35914 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
HMGCLP35914 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
HMGCLP35914 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGCLP35914 IPO8P1-201ENST00000455509 3109 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCLP35914 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCLP35914 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
HMGCLP35914 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
HMGCLP35914 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 RNA5SP283-201ENST00000365604 119 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCLP35914 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCLP35914 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 LINC01347-201ENST00000417964 355 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 MTCO2P1-201ENST00000424648 477 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCLP35914 MTCO3P21-201ENST00000430791 643 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCLP35914 AL158053.1-201ENST00000441503 453 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCLP35914 AC069540.1-201ENST00000446320 988 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 RPL21P47-201ENST00000483696 477 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCLP35914 AC016550.1-201ENST00000505348 785 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.92□□□□□ -1.78
HMGCLP35914 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCLP35914 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCLP35914 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCLP35914 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCLP35914 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.92□□□□□ -1.78
HMGCLP35914 AC092851.1-201ENST00000535964 478 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.92□□□□□ -1.78
HMGCLP35914 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.92□□□□□ -1.78
HMGCLP35914 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.92□□□□□ -1.78
HMGCLP35914 AC093510.2-201ENST00000562820 896 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCLP35914 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.92□□□□□ -1.78
HMGCLP35914 AP003392.5-201ENST00000607857 415 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCLP35914 AC006213.4-201ENST00000616184 634 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 AP004607.9-201ENST00000618202 316 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.92□□□□□ -1.78
HMGCLP35914 AC068724.3-201ENST00000625906 87 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.92□□□□□ -1.78
HMGCLP35914 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HMGCLP35914 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.92□□□□□ -1.78
HMGCLP35914 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCLP35914 MFSD8-220ENST00000641243 1422 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 UBE3AP2-201ENST00000429033 2259 ntBASIC3.92□□□□□ -1.78
HMGCLP35914 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCLP35914 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
HMGCLP35914 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HMGCLP35914 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCLP35914 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
HMGCLP35914 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms