Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.8□□□□□ -1.8
RORAP35398 RNU1-45P-201ENST00000517191 141 ntBASIC3.8□□□□□ -1.8
RORAP35398 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.8□□□□□ -1.8
RORAP35398 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.8□□□□□ -1.8
RORAP35398 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.8□□□□□ -1.8
RORAP35398 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.8□□□□□ -1.8
RORAP35398 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.8□□□□□ -1.8
RORAP35398 AC091516.1-201ENST00000549191 703 ntBASIC3.8□□□□□ -1.8
RORAP35398 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.8□□□□□ -1.8
RORAP35398 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.8□□□□□ -1.8
RORAP35398 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.8□□□□□ -1.8
RORAP35398 AC007599.1-201ENST00000568688 1174 ntBASIC3.8□□□□□ -1.8
RORAP35398 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.8□□□□□ -1.8
RORAP35398 AC115085.1-201ENST00000588924 229 ntBASIC3.8□□□□□ -1.8
RORAP35398 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.8□□□□□ -1.8
RORAP35398 AC105429.2-201ENST00000610567 517 ntBASIC3.8□□□□□ -1.8
RORAP35398 AC138649.5-201ENST00000637456 137 ntBASIC3.8□□□□□ -1.8
RORAP35398 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.8□□□□□ -1.8
RORAP35398 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.8□□□□□ -1.8
RORAP35398 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RORAP35398 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
RORAP35398 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.79□□□□□ -1.8
RORAP35398 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RORAP35398 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RORAP35398 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RORAP35398 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.79□□□□□ -1.8
RORAP35398 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.79□□□□□ -1.8
RORAP35398 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RORAP35398 MIR423-201ENST00000362201 94 ntBASIC3.79□□□□□ -1.8
RORAP35398 AL359837.1-201ENST00000381357 287 ntBASIC3.79□□□□□ -1.8
RORAP35398 AC004987.3-201ENST00000413879 771 ntBASIC3.79□□□□□ -1.8
RORAP35398 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.79□□□□□ -1.8
RORAP35398 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.79□□□□□ -1.8
RORAP35398 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.79□□□□□ -1.8
RORAP35398 AC007389.2-201ENST00000434630 306 ntBASIC3.79□□□□□ -1.8
RORAP35398 AC105402.2-201ENST00000438503 358 ntBASIC3.79□□□□□ -1.8
RORAP35398 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.79□□□□□ -1.8
RORAP35398 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.79□□□□□ -1.8
RORAP35398 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.79□□□□□ -1.8
RORAP35398 AC107398.1-201ENST00000486904 505 ntBASIC3.79□□□□□ -1.8
RORAP35398 AP002812.1-201ENST00000495378 474 ntBASIC3.79□□□□□ -1.8
RORAP35398 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.79□□□□□ -1.8
RORAP35398 SLC25A15P5-201ENST00000508033 253 ntBASIC3.79□□□□□ -1.8
RORAP35398 NDUFB4P9-201ENST00000511646 388 ntBASIC3.79□□□□□ -1.8
RORAP35398 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.79□□□□□ -1.8
RORAP35398 HMGB1P46-201ENST00000520062 610 ntBASIC3.79□□□□□ -1.8
RORAP35398 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.79□□□□□ -1.8
RORAP35398 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.79□□□□□ -1.8
RORAP35398 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.79□□□□□ -1.8
RORAP35398 MIR548Y-201ENST00000582739 110 ntBASIC3.79□□□□□ -1.8
RORAP35398 MIR3158-1-201ENST00000583596 81 ntBASIC3.79□□□□□ -1.8
RORAP35398 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.79□□□□□ -1.8
RORAP35398 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.79□□□□□ -1.8
RORAP35398 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.79□□□□□ -1.8
RORAP35398 AC104662.1-201ENST00000604448 511 ntBASIC3.79□□□□□ -1.8
RORAP35398 CR589904.2-201ENST00000612533 440 ntBASIC3.79□□□□□ -1.8
RORAP35398 AC245389.2-201ENST00000616023 576 ntBASIC3.79□□□□□ -1.8
RORAP35398 AC006133.1-201ENST00000617106 264 ntBASIC3.79□□□□□ -1.8
RORAP35398 AC242843.1-201ENST00000618702 573 ntBASIC3.79□□□□□ -1.8
RORAP35398 AL354798.1-201ENST00000622505 329 ntBASIC3.79□□□□□ -1.8
RORAP35398 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.79□□□□□ -1.8
RORAP35398 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RORAP35398 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.79□□□□□ -1.8
RORAP35398 AC066616.2-201ENST00000559334 1481 ntBASIC3.79□□□□□ -1.8
RORAP35398 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.79□□□□□ -1.8
RORAP35398 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
RORAP35398 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
RORAP35398 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RORAP35398 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RORAP35398 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.78□□□□□ -1.8
RORAP35398 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.78□□□□□ -1.8
RORAP35398 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
RORAP35398 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RORAP35398 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.78□□□□□ -1.8
RORAP35398 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.78□□□□□ -1.8
RORAP35398 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RORAP35398 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
RORAP35398 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RORAP35398 MIR23B-201ENST00000384832 97 ntBASIC3.78□□□□□ -1.8
RORAP35398 MIR153-1-201ENST00000384914 90 ntBASIC3.78□□□□□ -1.8
RORAP35398 RHEBP3-201ENST00000411920 351 ntBASIC3.78□□□□□ -1.8
RORAP35398 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RORAP35398 AL160175.1-201ENST00000428124 247 ntBASIC3.78□□□□□ -1.8
RORAP35398 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.78□□□□□ -1.8
RORAP35398 BMS1P19-201ENST00000433925 393 ntBASIC3.78□□□□□ -1.8
RORAP35398 XKRY2-201ENST00000442362 1093 ntBASIC3.78□□□□□ -1.8
RORAP35398 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.78□□□□□ -1.8
RORAP35398 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.78□□□□□ -1.8
RORAP35398 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.78□□□□□ -1.8
RORAP35398 HMGB3P22-202ENST00000451823 572 ntBASIC3.78□□□□□ -1.8
RORAP35398 ANP32BP2-201ENST00000454525 545 ntBASIC3.78□□□□□ -1.8
RORAP35398 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.78□□□□□ -1.8
RORAP35398 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.78□□□□□ -1.8
RORAP35398 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RORAP35398 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.78□□□□□ -1.8
RORAP35398 RNU2-58P-201ENST00000516403 183 ntBASIC3.78□□□□□ -1.8
RORAP35398 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.78□□□□□ -1.8
RORAP35398 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.78□□□□□ -1.8
RORAP35398 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.78□□□□□ -1.8
RORAP35398 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms