Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.77□□□□□ -1.81
SHMT2P34897 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SHMT2P34897 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.77□□□□□ -1.81
SHMT2P34897 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.77□□□□□ -1.81
SHMT2P34897 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.77□□□□□ -1.81
SHMT2P34897 AC106785.1-201ENST00000565935 262 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 MIR5685-201ENST00000579080 79 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
SHMT2P34897 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.77□□□□□ -1.81
SHMT2P34897 OR4H6P-202ENST00000603819 340 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 AC015849.2-201ENST00000605738 409 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 AC090617.9-201ENST00000623751 147 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.77□□□□□ -1.81
SHMT2P34897 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.77□□□□□ -1.81
SHMT2P34897 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.77□□□□□ -1.81
SHMT2P34897 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.77□□□□□ -1.81
SHMT2P34897 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHMT2P34897 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SHMT2P34897 FAM91A3P-201ENST00000456826 2544 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
SHMT2P34897 IPO8P1-201ENST00000455509 3109 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.76□□□□□ -1.81
SHMT2P34897 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHMT2P34897 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.76□□□□□ -1.81
SHMT2P34897 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SHMT2P34897 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SHMT2P34897 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHMT2P34897 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHMT2P34897 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.76□□□□□ -1.81
SHMT2P34897 RNU4-31P-201ENST00000384211 141 ntBASIC3.76□□□□□ -1.81
SHMT2P34897 MIR199A2-201ENST00000385289 110 ntBASIC3.76□□□□□ -1.81
SHMT2P34897 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SHMT2P34897 HMGB3P5-201ENST00000428894 612 ntBASIC3.76□□□□□ -1.81
SHMT2P34897 RPL34P26-201ENST00000445636 354 ntBASIC3.76□□□□□ -1.81
SHMT2P34897 AL672167.3-201ENST00000465951 960 ntBASIC3.76□□□□□ -1.81
SHMT2P34897 RN7SL323P-201ENST00000494712 295 ntBASIC3.76□□□□□ -1.81
SHMT2P34897 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.76□□□□□ -1.81
SHMT2P34897 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SHMT2P34897 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.76□□□□□ -1.81
SHMT2P34897 RNA5SP164-201ENST00000516533 110 ntBASIC3.76□□□□□ -1.81
SHMT2P34897 AC103833.1-201ENST00000517442 172 ntBASIC3.76□□□□□ -1.81
SHMT2P34897 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.76□□□□□ -1.81
SHMT2P34897 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.76□□□□□ -1.81
SHMT2P34897 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.76□□□□□ -1.81
SHMT2P34897 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.76□□□□□ -1.81
SHMT2P34897 AC010680.3-201ENST00000604215 520 ntBASIC3.76□□□□□ -1.81
SHMT2P34897 SUMO2P14-201ENST00000604488 293 ntBASIC3.76□□□□□ -1.81
SHMT2P34897 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.76□□□□□ -1.81
SHMT2P34897 AC073530.2-201ENST00000623987 261 ntBASIC3.76□□□□□ -1.81
SHMT2P34897 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.76□□□□□ -1.81
SHMT2P34897 ZNF90P1-201ENST00000480493 1951 ntBASIC3.76□□□□□ -1.81
SHMT2P34897 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.76□□□□□ -1.81
SHMT2P34897 OTUD4P1-201ENST00000237841 3067 ntBASIC3.76□□□□□ -1.81
SHMT2P34897 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SHMT2P34897 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.75□□□□□ -1.81
SHMT2P34897 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHMT2P34897 AC006042.3-201ENST00000454684 1469 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHMT2P34897 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SHMT2P34897 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.75□□□□□ -1.81
SHMT2P34897 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHMT2P34897 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.75□□□□□ -1.81
SHMT2P34897 ATP5F1P4-201ENST00000397288 746 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 AL356057.1-202ENST00000402263 756 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 SNORA3.3-201ENST00000408712 125 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 RHEBP3-201ENST00000411920 351 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.75□□□□□ -1.81
SHMT2P34897 AC105402.1-201ENST00000413336 545 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 NPM1P24-201ENST00000428039 894 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.75□□□□□ -1.81
SHMT2P34897 AL513321.1-201ENST00000441175 761 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.75□□□□□ -1.81
SHMT2P34897 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.75□□□□□ -1.81
SHMT2P34897 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.75□□□□□ -1.81
SHMT2P34897 FTH1P2-201ENST00000466086 412 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 AC020898.1-201ENST00000474167 787 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 AC091959.2-201ENST00000477363 321 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 GAPDHP36-201ENST00000480688 918 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 RPL7P24-201ENST00000493052 752 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.75□□□□□ -1.81
SHMT2P34897 MTND2P31-201ENST00000512602 616 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 AC005798.1-201ENST00000513715 387 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 MTND4LP31-201ENST00000514859 294 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 RN7SKP141-201ENST00000516167 338 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 SNORA31.13-201ENST00000516624 135 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.75□□□□□ -1.81
SHMT2P34897 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.75□□□□□ -1.81
SHMT2P34897 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.75□□□□□ -1.81
SHMT2P34897 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.75□□□□□ -1.81
SHMT2P34897 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.75□□□□□ -1.81
SHMT2P34897 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.75□□□□□ -1.81
SHMT2P34897 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.75□□□□□ -1.81
SHMT2P34897 HSPE1P5-201ENST00000561489 272 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 AC099489.2-201ENST00000574976 260 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.75□□□□□ -1.81
SHMT2P34897 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.75□□□□□ -1.81
SHMT2P34897 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.75□□□□□ -1.81
SHMT2P34897 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.75□□□□□ -1.81
SHMT2P34897 AL021368.1-201ENST00000607490 540 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms