Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.9□□□□□ -1.63
CIITAP33076 MLECP1-201ENST00000615893 709 ntBASIC4.9□□□□□ -1.63
CIITAP33076 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.9□□□□□ -1.63
CIITAP33076 AL158163.2-201ENST00000619110 700 ntBASIC4.9□□□□□ -1.63
CIITAP33076 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.9□□□□□ -1.63
CIITAP33076 MIR3653-201ENST00000625572 110 ntBASIC4.9□□□□□ -1.63
CIITAP33076 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.9□□□□□ -1.63
CIITAP33076 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CIITAP33076 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CIITAP33076 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CIITAP33076 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CIITAP33076 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
CIITAP33076 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.89□□□□□ -1.63
CIITAP33076 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CIITAP33076 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.89□□□□□ -1.63
CIITAP33076 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CIITAP33076 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CIITAP33076 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CIITAP33076 SNORD113-6-201ENST00000363345 75 ntBASIC4.89□□□□□ -1.63
CIITAP33076 OR6C69P-201ENST00000394268 893 ntBASIC4.89□□□□□ -1.63
CIITAP33076 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CIITAP33076 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.89□□□□□ -1.63
CIITAP33076 NIPA2P1-201ENST00000426223 976 ntBASIC4.89□□□□□ -1.63
CIITAP33076 RAC1P8-201ENST00000427086 527 ntBASIC4.89□□□□□ -1.63
CIITAP33076 ARL4AP3-201ENST00000441452 574 ntBASIC4.89□□□□□ -1.63
CIITAP33076 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.89□□□□□ -1.63
CIITAP33076 AC068135.1-201ENST00000446164 246 ntBASIC4.89□□□□□ -1.63
CIITAP33076 RPL23AP81-201ENST00000455252 467 ntBASIC4.89□□□□□ -1.63
CIITAP33076 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.89□□□□□ -1.63
CIITAP33076 RPL23AP44-201ENST00000482216 473 ntBASIC4.89□□□□□ -1.63
CIITAP33076 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.89□□□□□ -1.63
CIITAP33076 AC008958.1-201ENST00000511047 682 ntBASIC4.89□□□□□ -1.63
CIITAP33076 PRELID3BP4-201ENST00000515476 571 ntBASIC4.89□□□□□ -1.63
CIITAP33076 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CIITAP33076 RN7SKP122-201ENST00000515923 296 ntBASIC4.89□□□□□ -1.63
CIITAP33076 RNA5SP49-201ENST00000516450 115 ntBASIC4.89□□□□□ -1.63
CIITAP33076 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.89□□□□□ -1.63
CIITAP33076 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.89□□□□□ -1.63
CIITAP33076 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.89□□□□□ -1.63
CIITAP33076 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.89□□□□□ -1.63
CIITAP33076 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CIITAP33076 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.89□□□□□ -1.63
CIITAP33076 AL109766.1-201ENST00000555080 552 ntBASIC4.89□□□□□ -1.63
CIITAP33076 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.89□□□□□ -1.63
CIITAP33076 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.89□□□□□ -1.63
CIITAP33076 AL392112.1-201ENST00000605115 829 ntBASIC4.89□□□□□ -1.63
CIITAP33076 AC016877.3-201ENST00000606778 504 ntBASIC4.89□□□□□ -1.63
CIITAP33076 AC091979.2-201ENST00000607514 214 ntBASIC4.89□□□□□ -1.63
CIITAP33076 FAM27D1-201ENST00000612308 341 ntBASIC4.89□□□□□ -1.63
CIITAP33076 AL445567.2-201ENST00000618935 498 ntBASIC4.89□□□□□ -1.63
CIITAP33076 VN1R7P-201ENST00000619242 903 ntBASIC4.89□□□□□ -1.63
CIITAP33076 AL445363.3-201ENST00000623080 671 ntBASIC4.89□□□□□ -1.63
CIITAP33076 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CIITAP33076 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CIITAP33076 AC092162.3-201ENST00000624511 1624 ntBASIC4.89□□□□□ -1.63
CIITAP33076 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CIITAP33076 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CIITAP33076 AP001273.1-201ENST00000624493 3152 ntBASIC4.89□□□□□ -1.63
CIITAP33076 AC009951.1-201ENST00000623674 2614 ntBASIC4.89□□□□□ -1.63
CIITAP33076 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CIITAP33076 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CIITAP33076 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CIITAP33076 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.88□□□□□ -1.63
CIITAP33076 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CIITAP33076 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.88□□□□□ -1.63
CIITAP33076 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.88□□□□□ -1.63
CIITAP33076 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CIITAP33076 RPL32P3-201ENST00000359025 275 ntBASIC4.88□□□□□ -1.63
CIITAP33076 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CIITAP33076 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CIITAP33076 SNORD66.1-201ENST00000391230 76 ntBASIC4.88□□□□□ -1.63
CIITAP33076 RN7SKP235-201ENST00000410662 305 ntBASIC4.88□□□□□ -1.63
CIITAP33076 RPL23AP26-201ENST00000412728 464 ntBASIC4.88□□□□□ -1.63
CIITAP33076 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.88□□□□□ -1.63
CIITAP33076 MFSD13B-201ENST00000420133 1290 ntBASIC4.88□□□□□ -1.63
CIITAP33076 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.88□□□□□ -1.63
CIITAP33076 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.88□□□□□ -1.63
CIITAP33076 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.88□□□□□ -1.63
CIITAP33076 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.88□□□□□ -1.63
CIITAP33076 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.88□□□□□ -1.63
CIITAP33076 RPL7P29-201ENST00000437151 728 ntBASIC4.88□□□□□ -1.63
CIITAP33076 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.88□□□□□ -1.63
CIITAP33076 ARL5AP2-201ENST00000444698 533 ntBASIC4.88□□□□□ -1.63
CIITAP33076 PTENP1-201ENST00000447117 1215 ntBASIC4.88□□□□□ -1.63
CIITAP33076 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.88□□□□□ -1.63
CIITAP33076 RPL7P22-201ENST00000466005 733 ntBASIC4.88□□□□□ -1.63
CIITAP33076 AC109327.1-201ENST00000471666 403 ntBASIC4.88□□□□□ -1.63
CIITAP33076 RN7SL860P-201ENST00000473738 223 ntBASIC4.88□□□□□ -1.63
CIITAP33076 AC012158.1-204ENST00000483430 465 ntBASIC4.88□□□□□ -1.63
CIITAP33076 AC083829.1-201ENST00000503756 657 ntBASIC4.88□□□□□ -1.63
CIITAP33076 AC091860.1-201ENST00000505723 432 ntBASIC4.88□□□□□ -1.63
CIITAP33076 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CIITAP33076 Y_RNA.688-201ENST00000516565 95 ntBASIC4.88□□□□□ -1.63
CIITAP33076 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.88□□□□□ -1.63
CIITAP33076 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.88□□□□□ -1.63
CIITAP33076 MTCO3P15-201ENST00000526563 574 ntBASIC4.88□□□□□ -1.63
CIITAP33076 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.88□□□□□ -1.63
CIITAP33076 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.88□□□□□ -1.63
CIITAP33076 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.88□□□□□ -1.63
CIITAP33076 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms