Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
POLR2AP24928 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
POLR2AP24928 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
POLR2AP24928 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
POLR2AP24928 MCTS2P-201ENST00000394552 546 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 HMGB1P10-201ENST00000395823 563 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 RNU4-74P-201ENST00000411280 161 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 AC092638.1-201ENST00000411966 1275 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 AC008280.1-201ENST00000418851 412 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.14□□□□□ -1.59
POLR2AP24928 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.14□□□□□ -1.59
POLR2AP24928 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.14□□□□□ -1.59
POLR2AP24928 AL512326.1-201ENST00000443050 721 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 AL671855.1-201ENST00000446875 1203 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 AL500522.2-201ENST00000448562 343 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 CDC42P4-201ENST00000510507 563 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.14□□□□□ -1.59
POLR2AP24928 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.14□□□□□ -1.59
POLR2AP24928 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.14□□□□□ -1.59
POLR2AP24928 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.14□□□□□ -1.59
POLR2AP24928 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.14□□□□□ -1.59
POLR2AP24928 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.14□□□□□ -1.59
POLR2AP24928 AF131215.7-201ENST00000602443 707 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 AC006270.3-201ENST00000605967 1036 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 AC007684.1-201ENST00000609671 477 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 VN1R74P-201ENST00000613259 503 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 AC007014.2-201ENST00000615581 479 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 AL356266.1-201ENST00000623311 483 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
POLR2AP24928 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
POLR2AP24928 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
POLR2AP24928 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
POLR2AP24928 ADAM24P-201ENST00000398655 2101 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 OR10AB1P-202ENST00000641219 1686 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
POLR2AP24928 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
POLR2AP24928 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.13□□□□□ -1.59
POLR2AP24928 AL355852.1-201ENST00000454081 1771 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
POLR2AP24928 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.13□□□□□ -1.59
POLR2AP24928 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
POLR2AP24928 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
POLR2AP24928 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
POLR2AP24928 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.13□□□□□ -1.59
POLR2AP24928 AC104651.2-201ENST00000447549 528 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 GAPDHP36-201ENST00000480688 918 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 AL049874.2-201ENST00000492636 288 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.13□□□□□ -1.59
POLR2AP24928 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
POLR2AP24928 HIGD1AP18-201ENST00000520730 278 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.13□□□□□ -1.59
POLR2AP24928 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.13□□□□□ -1.59
POLR2AP24928 AC006349.1-201ENST00000555526 235 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.13□□□□□ -1.59
POLR2AP24928 NPM1P5-201ENST00000557228 838 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 AC002400.1-201ENST00000569310 726 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.13□□□□□ -1.59
POLR2AP24928 AC084757.4-201ENST00000616350 526 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 AL359314.1-201ENST00000616913 261 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 AC073968.1-201ENST00000618594 637 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 AL158062.1-201ENST00000619632 745 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 AC092162.3-201ENST00000624511 1624 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
POLR2AP24928 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
POLR2AP24928 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.13□□□□□ -1.59
POLR2AP24928 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
POLR2AP24928 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
POLR2AP24928 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
POLR2AP24928 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
POLR2AP24928 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.13□□□□□ -1.59
POLR2AP24928 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
POLR2AP24928 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.13□□□□□ -1.59
POLR2AP24928 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
POLR2AP24928 OR51H2P-202ENST00000641424 3046 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
POLR2AP24928 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
POLR2AP24928 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
POLR2AP24928 AP000357.1-201ENST00000409926 1165 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 CDK8P2-201ENST00000415020 547 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 AC079809.1-201ENST00000415468 276 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.13□□□□□ -1.59
POLR2AP24928 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.13□□□□□ -1.59
POLR2AP24928 MTCYBP34-201ENST00000439552 670 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.13□□□□□ -1.59
POLR2AP24928 AL929288.2-201ENST00000446368 407 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.13□□□□□ -1.59
POLR2AP24928 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.13□□□□□ -1.59
POLR2AP24928 LINC00888-204ENST00000487386 421 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 RN7SL812P-201ENST00000493791 279 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 SUMO1P1-201ENST00000497904 306 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
POLR2AP24928 CBX3P3-201ENST00000508108 532 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 RNA5SP116-201ENST00000516132 98 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.13□□□□□ -1.59
POLR2AP24928 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
POLR2AP24928 AL133241.1-201ENST00000556832 487 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.13□□□□□ -1.59
POLR2AP24928 AC234778.2-201ENST00000566241 354 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 AC009237.15-201ENST00000610252 501 ntBASIC5.13□□□□□ -1.59
POLR2AP24928 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms