Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RNA5SP372-201ENST00000390836 115 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 HMGB1P10-201ENST00000395823 563 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXC6P09630 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXC6P09630 AC016907.1-201ENST00000419483 435 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 HSPE1P16-201ENST00000426640 348 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 AC005189.1-201ENST00000431286 310 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HOXC6P09630 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXC6P09630 AL589765.3-201ENST00000446084 462 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXC6P09630 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC6P09630 HMGB1P5-202ENST00000451497 985 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXC6P09630 BET1P1-201ENST00000482276 359 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 RPL21P131-201ENST00000497298 483 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 AC091951.3-201ENST00000504093 246 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXC6P09630 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXC6P09630 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC6P09630 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC6P09630 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.74□□□□□ -1.65
HOXC6P09630 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXC6P09630 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC6P09630 OR8I1P-201ENST00000529291 931 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.74□□□□□ -1.65
HOXC6P09630 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXC6P09630 AC068993.1-201ENST00000546724 589 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 AC087897.1-201ENST00000550134 156 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 AL442163.2-201ENST00000553912 710 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXC6P09630 AC022655.2-201ENST00000577280 318 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 MIR3944-201ENST00000581277 108 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXC6P09630 MTCO2P22-201ENST00000603246 681 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXC6P09630 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXC6P09630 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HOXC6P09630 MIR6500-201ENST00000622700 86 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 AL512506.2-201ENST00000624472 458 ntBASIC4.74□□□□□ -1.65
HOXC6P09630 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
HOXC6P09630 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC6P09630 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXC6P09630 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HOXC6P09630 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HOXC6P09630 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC6P09630 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC6P09630 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
HOXC6P09630 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC6P09630 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC6P09630 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC6P09630 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXC6P09630 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.73□□□□□ -1.65
HOXC6P09630 AC016588.2-201ENST00000632484 3021 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 AC107021.2-201ENST00000567714 2095 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC6P09630 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.73□□□□□ -1.65
HOXC6P09630 AC105074.1-201ENST00000623380 3095 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC6P09630 RNU6-213P-201ENST00000384051 104 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 Y_RNA.472-201ENST00000384322 102 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 MIR195-201ENST00000385194 87 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 MIR137-201ENST00000385223 102 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC6P09630 AC010385.1-201ENST00000412374 256 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 AC023128.2-201ENST00000420880 1223 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXC6P09630 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXC6P09630 RPL38P1-201ENST00000460914 211 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 PRDX3P4-201ENST00000470828 747 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 AF213884.1-201ENST00000488102 463 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC6P09630 BNIP3P41-201ENST00000503774 571 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 HPRT1P2-201ENST00000505250 544 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXC6P09630 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXC6P09630 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXC6P09630 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXC6P09630 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC6P09630 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXC6P09630 AC009094.1-201ENST00000564443 426 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 MTCYBP28-201ENST00000566728 1132 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC6P09630 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.73□□□□□ -1.65
HOXC6P09630 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.73□□□□□ -1.65
HOXC6P09630 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HOXC6P09630 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXC6P09630 AC139713.2-210ENST00000641741 992 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC6P09630 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
HOXC6P09630 BTBD10P1-201ENST00000549824 1352 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.73□□□□□ -1.65
HOXC6P09630 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC6P09630 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC6P09630 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC6P09630 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.73□□□□□ -1.65
HOXC6P09630 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXC6P09630 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC6P09630 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC6P09630 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms