Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MIR2116-201ENST00000517221 80 ntBASIC3.36□□□□□ -1.87
HLA-DPB1P04440 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AC040174.2-201ENST00000602701 465 ntBASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AC115621.1-201ENST00000604653 858 ntBASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AL365503.1-201ENST00000605247 905 ntBASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AC092653.1-201ENST00000608509 531 ntBASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 BMS1P21-201ENST00000634565 365 ntBASIC3.36□□□□□ -1.87
HLA-DPB1P04440 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AC114546.3-201ENST00000623582 1734 ntBASIC3.36□□□□□ -1.87
HLA-DPB1P04440 AC006042.3-201ENST00000454684 1469 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 RNU6-317P-201ENST00000384031 107 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AL356057.1-202ENST00000402263 756 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AL357078.2-201ENST00000416486 427 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AC009965.2-201ENST00000425328 970 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 MED6P1-201ENST00000439659 713 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 HSFY6P-201ENST00000445573 403 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AC006480.1-201ENST00000449887 378 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 IFNWP4-201ENST00000453148 294 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 CABYRP1-201ENST00000465493 1045 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AC093663.2-201ENST00000484625 313 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 SNORA31.13-201ENST00000516624 135 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 OR5AP1P-201ENST00000529730 940 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AGGF1P8-201ENST00000562979 1000 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 ZNF92P3-201ENST00000596594 954 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AL606490.9-201ENST00000603331 271 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AC067959.1-201ENST00000604334 379 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AL592436.1-201ENST00000605135 558 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AC135178.6-201ENST00000605314 398 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AL450270.1-201ENST00000606160 391 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 MIR6875-201ENST00000617506 72 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AL645927.2-201ENST00000618350 349 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AC090617.9-201ENST00000623751 147 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AC073530.2-201ENST00000623987 261 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AC068724.3-201ENST00000625906 87 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 MTND4P21-201ENST00000453886 1357 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 GTF2H2B-203ENST00000508065 1432 ntBASIC3.35□□□□□ -1.87
HLA-DPB1P04440 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HLA-DPB1P04440 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 RPL31P52-201ENST00000407532 367 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 Z97055.1-201ENST00000419730 712 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 OR8F1P-201ENST00000425243 930 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 OSTCP5-201ENST00000425293 453 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 NIPA2P1-201ENST00000426223 976 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 RPL21P89-201ENST00000444021 467 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 MTND2P8-201ENST00000450555 1025 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AC006539.3-201ENST00000454258 129 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AC006511.1-201ENST00000470614 315 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 CYCSP20-201ENST00000473154 315 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AC108729.2-201ENST00000476543 840 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AC011037.1-201ENST00000483964 558 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms