Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ZNF965P-201ENST00000432501 817 ntBASIC4.24□□□□□ -1.73
CHRNA1P02708 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.24□□□□□ -1.73
CHRNA1P02708 RSL24D1P8-201ENST00000434442 492 ntBASIC4.24□□□□□ -1.73
CHRNA1P02708 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.24□□□□□ -1.73
CHRNA1P02708 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CHRNA1P02708 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.24□□□□□ -1.73
CHRNA1P02708 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.24□□□□□ -1.73
CHRNA1P02708 PDSS1P2-201ENST00000449397 678 ntBASIC4.24□□□□□ -1.73
CHRNA1P02708 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.24□□□□□ -1.73
CHRNA1P02708 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.24□□□□□ -1.73
CHRNA1P02708 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.24□□□□□ -1.73
CHRNA1P02708 TPRKBP1-201ENST00000456243 481 ntBASIC4.24□□□□□ -1.73
CHRNA1P02708 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.24□□□□□ -1.73
CHRNA1P02708 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.24□□□□□ -1.73
CHRNA1P02708 AC111193.1-201ENST00000504097 155 ntBASIC4.24□□□□□ -1.73
CHRNA1P02708 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.24□□□□□ -1.73
CHRNA1P02708 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.24□□□□□ -1.73
CHRNA1P02708 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CHRNA1P02708 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.24□□□□□ -1.73
CHRNA1P02708 AC244505.7-201ENST00000599675 272 ntBASIC4.24□□□□□ -1.73
CHRNA1P02708 AC019176.2-201ENST00000611579 315 ntBASIC4.24□□□□□ -1.73
CHRNA1P02708 AL118556.2-201ENST00000614375 824 ntBASIC4.24□□□□□ -1.73
CHRNA1P02708 MIR7973-1-201ENST00000614683 76 ntBASIC4.24□□□□□ -1.73
CHRNA1P02708 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHRNA1P02708 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.24□□□□□ -1.73
CHRNA1P02708 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHRNA1P02708 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.24□□□□□ -1.73
CHRNA1P02708 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHRNA1P02708 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHRNA1P02708 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHRNA1P02708 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CHRNA1P02708 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CHRNA1P02708 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHRNA1P02708 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHRNA1P02708 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CHRNA1P02708 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHRNA1P02708 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CHRNA1P02708 SNORD51.1-201ENST00000365405 77 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CHRNA1P02708 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHRNA1P02708 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.23□□□□□ -1.73
CHRNA1P02708 RNU4-74P-201ENST00000411280 161 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 MTND4P24-201ENST00000424002 397 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 NANOGP6-201ENST00000429190 847 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.23□□□□□ -1.73
CHRNA1P02708 HMGN2P31-201ENST00000432430 273 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 HLA-N-201ENST00000437516 135 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.23□□□□□ -1.73
CHRNA1P02708 CBX1P4-201ENST00000439415 457 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.23□□□□□ -1.73
CHRNA1P02708 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.23□□□□□ -1.73
CHRNA1P02708 AL451050.1-201ENST00000450126 415 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.23□□□□□ -1.73
CHRNA1P02708 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.23□□□□□ -1.73
CHRNA1P02708 UBDP1-202ENST00000457888 382 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.23□□□□□ -1.73
CHRNA1P02708 SYT14P1-201ENST00000481459 721 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 OR52A4P-202ENST00000481634 799 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 AC106872.2-201ENST00000494303 480 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 RPS6P4-201ENST00000494693 758 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.23□□□□□ -1.73
CHRNA1P02708 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.23□□□□□ -1.73
CHRNA1P02708 DUXAP2-201ENST00000519198 589 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.23□□□□□ -1.73
CHRNA1P02708 AC022695.1-201ENST00000522089 237 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 OR4A12P-201ENST00000530847 918 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.23□□□□□ -1.73
CHRNA1P02708 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.23□□□□□ -1.73
CHRNA1P02708 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.23□□□□□ -1.73
CHRNA1P02708 CBX3P2-202ENST00000583365 535 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 MIR5187-201ENST00000583479 76 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 AC012314.7-201ENST00000619693 93 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 AL357559.1-201ENST00000622228 274 ntBASIC4.23□□□□□ -1.73
CHRNA1P02708 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHRNA1P02708 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.23□□□□□ -1.73
CHRNA1P02708 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.22□□□□□ -1.73
CHRNA1P02708 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.22□□□□□ -1.73
CHRNA1P02708 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.22□□□□□ -1.73
CHRNA1P02708 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHRNA1P02708 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHRNA1P02708 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CHRNA1P02708 AC007685.1-201ENST00000329806 452 ntBASIC4.22□□□□□ -1.73
CHRNA1P02708 RNU6-317P-201ENST00000384031 107 ntBASIC4.22□□□□□ -1.73
CHRNA1P02708 MIR199A2-201ENST00000385289 110 ntBASIC4.22□□□□□ -1.73
CHRNA1P02708 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.22□□□□□ -1.73
CHRNA1P02708 RNA5SP39-201ENST00000411245 120 ntBASIC4.22□□□□□ -1.73
CHRNA1P02708 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.22□□□□□ -1.73
CHRNA1P02708 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.22□□□□□ -1.73
CHRNA1P02708 FAM204CP-201ENST00000424489 642 ntBASIC4.22□□□□□ -1.73
CHRNA1P02708 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.22□□□□□ -1.73
CHRNA1P02708 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CHRNA1P02708 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.22□□□□□ -1.73
CHRNA1P02708 CYCSP43-201ENST00000438233 310 ntBASIC4.22□□□□□ -1.73
CHRNA1P02708 HMGB1P37-201ENST00000439613 609 ntBASIC4.22□□□□□ -1.73
CHRNA1P02708 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.22□□□□□ -1.73
CHRNA1P02708 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CHRNA1P02708 AC104687.1-201ENST00000485829 412 ntBASIC4.22□□□□□ -1.73
CHRNA1P02708 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.22□□□□□ -1.73
CHRNA1P02708 AC025459.1-201ENST00000504072 156 ntBASIC4.22□□□□□ -1.73
CHRNA1P02708 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms