Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 HIGD1AP12-201ENST00000427832 281 ntBASIC4.34□□□□□ -1.71
COL2A1P02458 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.34□□□□□ -1.71
COL2A1P02458 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL2A1P02458 ATP5JP1-201ENST00000431631 322 ntBASIC4.34□□□□□ -1.71
COL2A1P02458 UBE2V2P1-201ENST00000434717 398 ntBASIC4.34□□□□□ -1.71
COL2A1P02458 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.34□□□□□ -1.71
COL2A1P02458 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.34□□□□□ -1.71
COL2A1P02458 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.34□□□□□ -1.71
COL2A1P02458 AC025181.1-201ENST00000477507 416 ntBASIC4.34□□□□□ -1.71
COL2A1P02458 RPL21P6-201ENST00000479171 504 ntBASIC4.34□□□□□ -1.71
COL2A1P02458 SETP14-201ENST00000497538 873 ntBASIC4.34□□□□□ -1.71
COL2A1P02458 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.34□□□□□ -1.71
COL2A1P02458 AC113398.2-201ENST00000507630 558 ntBASIC4.34□□□□□ -1.71
COL2A1P02458 MTCO3P28-201ENST00000513351 515 ntBASIC4.34□□□□□ -1.71
COL2A1P02458 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.34□□□□□ -1.71
COL2A1P02458 AC117525.1-201ENST00000515228 503 ntBASIC4.34□□□□□ -1.71
COL2A1P02458 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.34□□□□□ -1.71
COL2A1P02458 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.34□□□□□ -1.71
COL2A1P02458 AL049838.1-201ENST00000563647 981 ntBASIC4.34□□□□□ -1.71
COL2A1P02458 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.34□□□□□ -1.71
COL2A1P02458 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.34□□□□□ -1.71
COL2A1P02458 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.34□□□□□ -1.71
COL2A1P02458 AC068620.4-201ENST00000636730 1182 ntBASIC4.34□□□□□ -1.71
COL2A1P02458 MTND2P41-201ENST00000637599 773 ntBASIC4.34□□□□□ -1.71
COL2A1P02458 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL2A1P02458 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
COL2A1P02458 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
COL2A1P02458 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.33□□□□□ -1.72
COL2A1P02458 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
COL2A1P02458 AL365440.1-201ENST00000436135 2167 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL2A1P02458 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL2A1P02458 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL2A1P02458 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL2A1P02458 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL2A1P02458 RNU6-584P-201ENST00000410350 95 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 AC069282.1-201ENST00000411911 526 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 ZNF885P-201ENST00000420174 1098 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 AC245054.1-201ENST00000420944 258 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 AL365338.1-201ENST00000422282 858 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.33□□□□□ -1.72
COL2A1P02458 HMGN1P5-201ENST00000448591 263 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.33□□□□□ -1.72
COL2A1P02458 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.33□□□□□ -1.72
COL2A1P02458 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL2A1P02458 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.33□□□□□ -1.72
COL2A1P02458 PRELID3BP6-201ENST00000503839 571 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 BOLA3P3-201ENST00000505182 232 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.33□□□□□ -1.72
COL2A1P02458 SUMO2P20-201ENST00000520803 283 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 LRRC34P1-201ENST00000542742 915 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 AC007458.1-201ENST00000542812 373 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.33□□□□□ -1.72
COL2A1P02458 AC106785.3-201ENST00000564064 847 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.33□□□□□ -1.72
COL2A1P02458 BNIP3P38-201ENST00000601117 544 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 AL445435.1-201ENST00000604232 665 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 AC133552.5-201ENST00000604266 540 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 AC116312.1-201ENST00000606841 314 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 AC010872.1-201ENST00000624225 675 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 AC099654.8-201ENST00000637757 681 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 OR5AC4P-202ENST00000642086 985 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 BDP1P-201ENST00000582658 1990 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL2A1P02458 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL2A1P02458 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL2A1P02458 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.33□□□□□ -1.72
COL2A1P02458 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL2A1P02458 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.33□□□□□ -1.72
COL2A1P02458 SEPT7P7-201ENST00000420492 1301 ntBASIC4.33□□□□□ -1.72
COL2A1P02458 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL2A1P02458 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL2A1P02458 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL2A1P02458 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL2A1P02458 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL2A1P02458 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL2A1P02458 MIR122-201ENST00000385044 85 ntBASIC4.32□□□□□ -1.72
COL2A1P02458 AL603766.1-201ENST00000407763 664 ntBASIC4.32□□□□□ -1.72
COL2A1P02458 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.32□□□□□ -1.72
COL2A1P02458 CETN4P-201ENST00000432407 469 ntBASIC4.32□□□□□ -1.72
COL2A1P02458 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.32□□□□□ -1.72
COL2A1P02458 AC074367.1-201ENST00000438685 1125 ntBASIC4.32□□□□□ -1.72
COL2A1P02458 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.32□□□□□ -1.72
COL2A1P02458 RNFT1P2-201ENST00000443064 757 ntBASIC4.32□□□□□ -1.72
COL2A1P02458 RPS15AP29-201ENST00000445539 400 ntBASIC4.32□□□□□ -1.72
COL2A1P02458 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.32□□□□□ -1.72
COL2A1P02458 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.32□□□□□ -1.72
COL2A1P02458 RPL37P3-201ENST00000456825 293 ntBASIC4.32□□□□□ -1.72
COL2A1P02458 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.32□□□□□ -1.72
COL2A1P02458 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.32□□□□□ -1.72
COL2A1P02458 HMGB3P13-201ENST00000511263 607 ntBASIC4.32□□□□□ -1.72
COL2A1P02458 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.32□□□□□ -1.72
COL2A1P02458 AC103843.2-201ENST00000530523 682 ntBASIC4.32□□□□□ -1.72
COL2A1P02458 AC008011.1-201ENST00000545989 227 ntBASIC4.32□□□□□ -1.72
COL2A1P02458 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.32□□□□□ -1.72
COL2A1P02458 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.32□□□□□ -1.72
COL2A1P02458 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.32□□□□□ -1.72
COL2A1P02458 AC015802.5-201ENST00000607478 399 ntBASIC4.32□□□□□ -1.72
COL2A1P02458 AC106052.1-201ENST00000608029 497 ntBASIC4.32□□□□□ -1.72
COL2A1P02458 AC069209.1-201ENST00000619282 651 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms