Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC008565.1-201ENST00000509046 885 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 MTND1P6-201ENST00000523621 946 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AC083923.1-201ENST00000523708 376 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 C1DP5-201ENST00000525775 383 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AL389895.1-201ENST00000554127 252 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AL161713.1-201ENST00000555538 145 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AC104229.1-201ENST00000561364 255 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 MIR5047-201ENST00000579212 100 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 RPL12P25-202ENST00000598100 674 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AC008782.1-201ENST00000603386 430 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AC113194.1-201ENST00000606037 500 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 BX323046.1-201ENST00000610145 535 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AC119744.1-201ENST00000454746 1715 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AL136964.1-201ENST00000622038 2990 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AL049737.1-201ENST00000413920 1403 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 DHX40P1-201ENST00000588725 1412 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 ST7-212ENST00000422922 1887 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AC022031.1-201ENST00000585985 2593 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 ENSAP3-201ENST00000312710 333 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 SNORA70F-201ENST00000384142 135 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 HNRNPDP2-201ENST00000406475 478 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 RNU2-65P-201ENST00000410162 185 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 RPL7AP73-201ENST00000413490 353 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 RPS15AP6-201ENST00000420703 385 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AL157831.1-201ENST00000426134 473 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 CNOT7P1-201ENST00000429006 852 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 ETF1P3-201ENST00000430422 1160 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 HMGB3P8-201ENST00000449709 577 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 CYCSP53-201ENST00000455540 265 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AC096992.1-201ENST00000459808 709 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 CYCSP20-201ENST00000473154 315 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AK3P4-201ENST00000504283 583 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 PCBP2P3-201ENST00000509726 843 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 SUMO2P20-201ENST00000520803 283 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AC008562.1-201ENST00000521763 330 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AC137768.1-201ENST00000549998 553 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AC027104.1-201ENST00000563702 681 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AC106734.1-201ENST00000568646 663 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 MIR4458-201ENST00000578872 75 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 MIR4738-201ENST00000579134 87 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AC125494.3-201ENST00000602759 455 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AC092474.3-201ENST00000603022 568 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 NTAN1P1-201ENST00000603150 646 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AC005776.1-201ENST00000603164 290 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AC083899.3-201ENST00000603413 594 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 MIR6820-201ENST00000611508 62 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 MIR6780A-201ENST00000615089 68 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 FRG1HP-204ENST00000617940 757 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 uc_338.13-201ENST00000618243 179 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AC024595.1-201ENST00000623088 387 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 AP000843.1-201ENST00000624880 701 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 RAD17P1-201ENST00000418130 2042 ntBASIC2.95□□□□□ -1.94
HLA-DQA1P01909 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DQA1P01909 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 RNU6-481P-201ENST00000384194 107 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 ATP5F1P6-201ENST00000402768 767 ntBASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQA1P01909 AC004987.3-201ENST00000413879 771 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms