Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.14□□□□□ -1.59
CNOT4O95628 RNA5SP216-201ENST00000516111 123 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 snoU109.5-201ENST00000516231 132 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 RNU6-1261P-201ENST00000517194 104 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.14□□□□□ -1.59
CNOT4O95628 AK6P1-201ENST00000540219 478 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.14□□□□□ -1.59
CNOT4O95628 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.14□□□□□ -1.59
CNOT4O95628 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.14□□□□□ -1.59
CNOT4O95628 TRAV15-201ENST00000556680 249 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.14□□□□□ -1.59
CNOT4O95628 MIR5697-201ENST00000578045 78 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 AC115286.1-201ENST00000604298 434 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.14□□□□□ -1.59
CNOT4O95628 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CNOT4O95628 MIR6730-201ENST00000622213 67 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 AP002505.2-201ENST00000623585 696 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.14□□□□□ -1.59
CNOT4O95628 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.14□□□□□ -1.59
CNOT4O95628 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.14□□□□□ -1.59
CNOT4O95628 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNOT4O95628 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CNOT4O95628 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNOT4O95628 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNOT4O95628 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CNOT4O95628 AC004817.4-201ENST00000602396 3625 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.14□□□□□ -1.59
CNOT4O95628 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CNOT4O95628 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.14□□□□□ -1.59
CNOT4O95628 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CNOT4O95628 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNOT4O95628 AC117529.2-201ENST00000512159 2068 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNOT4O95628 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.14□□□□□ -1.59
CNOT4O95628 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CNOT4O95628 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CNOT4O95628 AC007529.1-201ENST00000418574 2178 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.14□□□□□ -1.59
CNOT4O95628 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.13□□□□□ -1.59
CNOT4O95628 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNOT4O95628 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CNOT4O95628 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNOT4O95628 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNOT4O95628 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNOT4O95628 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNOT4O95628 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.13□□□□□ -1.59
CNOT4O95628 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CNOT4O95628 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CNOT4O95628 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNOT4O95628 RNU6-462P-201ENST00000362659 105 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 RNU6-582P-201ENST00000362989 107 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 Y_RNA.89-201ENST00000363031 102 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 RNU6-492P-201ENST00000363035 104 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 RNA5SP391-201ENST00000363456 119 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 RN7SKP160-201ENST00000363804 340 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 SNORA74A-201ENST00000364089 198 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 Y_RNA.263-201ENST00000364659 114 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 AL356057.2-201ENST00000403318 432 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 PRRC2CP1-201ENST00000404428 159 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 RN7SKP17-201ENST00000411242 351 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.13□□□□□ -1.59
CNOT4O95628 USP9YP20-201ENST00000419224 558 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 AC093155.2-201ENST00000420734 937 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.13□□□□□ -1.59
CNOT4O95628 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.13□□□□□ -1.59
CNOT4O95628 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.13□□□□□ -1.59
CNOT4O95628 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.13□□□□□ -1.59
CNOT4O95628 RPL37P21-201ENST00000435890 276 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.13□□□□□ -1.59
CNOT4O95628 RPS12P17-201ENST00000438591 377 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.13□□□□□ -1.59
CNOT4O95628 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.13□□□□□ -1.59
CNOT4O95628 HMGN1P10-201ENST00000474557 553 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 RN7SL570P-201ENST00000484405 292 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 NIP7P2-201ENST00000485801 544 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.13□□□□□ -1.59
CNOT4O95628 NDUFA5P12-201ENST00000503796 343 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 SCARNA15.1-201ENST00000516384 125 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 MIR2117-201ENST00000516780 80 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.13□□□□□ -1.59
CNOT4O95628 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CNOT4O95628 HSPE1P2-201ENST00000554777 306 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 AL157687.1-201ENST00000554853 619 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 HMGB3P26-201ENST00000560051 582 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
CNOT4O95628 AC010547.6-201ENST00000571789 193 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CNOT4O95628 MIR4458-201ENST00000578872 75 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.13□□□□□ -1.59
CNOT4O95628 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.13□□□□□ -1.59
CNOT4O95628 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNOT4O95628 MEMO1P5-201ENST00000604810 406 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 AC093388.1-201ENST00000609166 430 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.13□□□□□ -1.59
CNOT4O95628 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNOT4O95628 RN7SL544P-201ENST00000617232 284 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.13□□□□□ -1.59
CNOT4O95628 RN7SL763P-201ENST00000620922 284 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms