Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SEMA3DO95025 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.64□□□□□ -1.83
SEMA3DO95025 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SEMA3DO95025 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SEMA3DO95025 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
SEMA3DO95025 MTHFD2P2-201ENST00000407725 247 ntBASIC3.64□□□□□ -1.83
SEMA3DO95025 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.64□□□□□ -1.83
SEMA3DO95025 AL390879.2-203ENST00000426943 1121 ntBASIC3.64□□□□□ -1.83
SEMA3DO95025 HIGD1AP12-201ENST00000427832 281 ntBASIC3.64□□□□□ -1.83
SEMA3DO95025 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.64□□□□□ -1.83
SEMA3DO95025 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.64□□□□□ -1.83
SEMA3DO95025 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.64□□□□□ -1.83
SEMA3DO95025 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.64□□□□□ -1.83
SEMA3DO95025 RN7SL385P-201ENST00000468873 276 ntBASIC3.64□□□□□ -1.83
SEMA3DO95025 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.64□□□□□ -1.83
SEMA3DO95025 AC021087.2-201ENST00000504656 1203 ntBASIC3.64□□□□□ -1.83
SEMA3DO95025 MTND5P21-201ENST00000531961 522 ntBASIC3.64□□□□□ -1.83
SEMA3DO95025 AP004242.1-201ENST00000533701 349 ntBASIC3.64□□□□□ -1.83
SEMA3DO95025 CYCSP30-201ENST00000546447 172 ntBASIC3.64□□□□□ -1.83
SEMA3DO95025 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.64□□□□□ -1.83
SEMA3DO95025 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.64□□□□□ -1.83
SEMA3DO95025 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.64□□□□□ -1.83
SEMA3DO95025 MIR3186-201ENST00000577404 85 ntBASIC3.64□□□□□ -1.83
SEMA3DO95025 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.64□□□□□ -1.83
SEMA3DO95025 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.64□□□□□ -1.83
SEMA3DO95025 AC015726.1-201ENST00000602353 681 ntBASIC3.64□□□□□ -1.83
SEMA3DO95025 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.64□□□□□ -1.83
SEMA3DO95025 AC016957.2-201ENST00000616998 848 ntBASIC3.64□□□□□ -1.83
SEMA3DO95025 AC092628.2-201ENST00000622492 339 ntBASIC3.64□□□□□ -1.83
SEMA3DO95025 AC091905.1-201ENST00000624400 311 ntBASIC3.64□□□□□ -1.83
SEMA3DO95025 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SEMA3DO95025 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SEMA3DO95025 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SEMA3DO95025 DCAF13P1-201ENST00000495256 1330 ntBASIC3.64□□□□□ -1.83
SEMA3DO95025 MTCO1P8-201ENST00000416914 1523 ntBASIC3.64□□□□□ -1.83
SEMA3DO95025 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.63□□□□□ -1.83
SEMA3DO95025 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SEMA3DO95025 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SEMA3DO95025 MIR372-201ENST00000362225 67 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
SEMA3DO95025 RNU6-532P-201ENST00000384318 107 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 MIR7-1-201ENST00000384871 110 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 RNF19BPX-201ENST00000426224 625 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 USP9YP31-201ENST00000431405 881 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.63□□□□□ -1.83
SEMA3DO95025 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.63□□□□□ -1.83
SEMA3DO95025 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.63□□□□□ -1.83
SEMA3DO95025 AC006480.1-201ENST00000449887 378 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 OR9M1P-201ENST00000459641 921 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.63□□□□□ -1.83
SEMA3DO95025 RPL7P48-201ENST00000461513 746 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 TRBV12-2-201ENST00000489763 344 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 HMGB1P21-201ENST00000502313 581 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 UBE2CP3-201ENST00000502715 450 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 RAC1P2-201ENST00000511164 579 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 HIGD1AP18-201ENST00000520730 278 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.63□□□□□ -1.83
SEMA3DO95025 HIGD1AP5-201ENST00000529959 259 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 PDCL2P2-201ENST00000533651 189 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.63□□□□□ -1.83
SEMA3DO95025 AC022146.1-201ENST00000595307 847 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SEMA3DO95025 ZYXP1-201ENST00000617638 118 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SEMA3DO95025 RNA5SP196-201ENST00000625967 102 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SEMA3DO95025 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SEMA3DO95025 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SEMA3DO95025 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SEMA3DO95025 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SEMA3DO95025 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.63□□□□□ -1.83
SEMA3DO95025 PRO1804-201ENST00000623780 2050 ntBASIC3.63□□□□□ -1.83
SEMA3DO95025 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SEMA3DO95025 RNU6-244P-201ENST00000391028 104 ntBASIC3.62□□□□□ -1.83
SEMA3DO95025 Y_RNA.625-201ENST00000411256 107 ntBASIC3.62□□□□□ -1.83
SEMA3DO95025 AC069218.2-201ENST00000411665 344 ntBASIC3.62□□□□□ -1.83
SEMA3DO95025 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.62□□□□□ -1.83
SEMA3DO95025 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.62□□□□□ -1.83
SEMA3DO95025 AC007390.1-201ENST00000415722 356 ntBASIC3.62□□□□□ -1.83
SEMA3DO95025 BTF3P9-201ENST00000418784 283 ntBASIC3.62□□□□□ -1.83
SEMA3DO95025 YY1P1-201ENST00000427625 668 ntBASIC3.62□□□□□ -1.83
SEMA3DO95025 NDUFA5P10-201ENST00000432147 357 ntBASIC3.62□□□□□ -1.83
SEMA3DO95025 SETD6P1-201ENST00000444575 317 ntBASIC3.62□□□□□ -1.83
SEMA3DO95025 MORF4L1P4-201ENST00000450245 976 ntBASIC3.62□□□□□ -1.83
SEMA3DO95025 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.62□□□□□ -1.83
SEMA3DO95025 MTCO3P16-201ENST00000454456 754 ntBASIC3.62□□□□□ -1.83
SEMA3DO95025 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.62□□□□□ -1.83
SEMA3DO95025 AC010307.1-201ENST00000467206 836 ntBASIC3.62□□□□□ -1.83
SEMA3DO95025 AC078817.1-201ENST00000492623 435 ntBASIC3.62□□□□□ -1.83
SEMA3DO95025 RPL5P23-201ENST00000496040 868 ntBASIC3.62□□□□□ -1.83
SEMA3DO95025 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.62□□□□□ -1.83
SEMA3DO95025 AC010460.1-201ENST00000507087 466 ntBASIC3.62□□□□□ -1.83
SEMA3DO95025 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.62□□□□□ -1.83
SEMA3DO95025 RNU6-491P-201ENST00000516099 110 ntBASIC3.62□□□□□ -1.83
SEMA3DO95025 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.62□□□□□ -1.83
SEMA3DO95025 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SEMA3DO95025 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.62□□□□□ -1.83
SEMA3DO95025 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.62□□□□□ -1.83
SEMA3DO95025 SNORA62.6-201ENST00000606322 83 ntBASIC3.62□□□□□ -1.83
SEMA3DO95025 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 268.3 ms