Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC1.51□□□□□ -2.17
USH2AO75445 VN1R40P-201ENST00000455196 941 ntBASIC1.51□□□□□ -2.17
USH2AO75445 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC1.51□□□□□ -2.17
USH2AO75445 MIR4660-201ENST00000583549 74 ntBASIC1.51□□□□□ -2.17
USH2AO75445 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC1.51□□□□□ -2.17
USH2AO75445 MIR7851-201ENST00000610611 160 ntBASIC1.51□□□□□ -2.17
USH2AO75445 AL732618.1-201ENST00000623251 301 ntBASIC1.51□□□□□ -2.17
USH2AO75445 AC243829.7-201ENST00000633081 225 ntBASIC1.51□□□□□ -2.17
USH2AO75445 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
USH2AO75445 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
USH2AO75445 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC1.51□□□□□ -2.17
USH2AO75445 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
USH2AO75445 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC1.51□□□□□ -2.17
USH2AO75445 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
USH2AO75445 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC1.51□□□□□ -2.17
USH2AO75445 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC1.51□□□□□ -2.17
USH2AO75445 EEF1B2P7-201ENST00000451177 676 ntBASIC1.51□□□□□ -2.17
USH2AO75445 AC090151.1-201ENST00000520784 730 ntBASIC1.51□□□□□ -2.17
USH2AO75445 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.51□□□□□ -2.17
USH2AO75445 AC023161.2-201ENST00000551218 780 ntBASIC1.51□□□□□ -2.17
USH2AO75445 AC023389.2-201ENST00000580031 955 ntBASIC1.51□□□□□ -2.17
USH2AO75445 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC1.51□□□□□ -2.17
USH2AO75445 AC064859.1-201ENST00000624741 174 ntBASIC1.51□□□□□ -2.17
USH2AO75445 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC1.51□□□□□ -2.17
USH2AO75445 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
USH2AO75445 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
USH2AO75445 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
USH2AO75445 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
USH2AO75445 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
USH2AO75445 Z83843.1-201ENST00000604070 3685 ntBASIC1.51□□□□□ -2.17
USH2AO75445 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
USH2AO75445 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC1.51□□□□□ -2.17
USH2AO75445 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
USH2AO75445 RPL21P75-201ENST00000396599 483 ntBASIC1.51□□□□□ -2.17
USH2AO75445 RPL21P1-201ENST00000399532 476 ntBASIC1.51□□□□□ -2.17
USH2AO75445 RPL21P28-201ENST00000401418 483 ntBASIC1.51□□□□□ -2.17
USH2AO75445 AL592114.1-201ENST00000403842 483 ntBASIC1.51□□□□□ -2.17
USH2AO75445 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC1.51□□□□□ -2.17
USH2AO75445 VTI1BP4-201ENST00000427516 527 ntBASIC1.51□□□□□ -2.17
USH2AO75445 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.51□□□□□ -2.17
USH2AO75445 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC1.51□□□□□ -2.17
USH2AO75445 RPL21P16-201ENST00000495531 483 ntBASIC1.51□□□□□ -2.17
USH2AO75445 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC1.51□□□□□ -2.17
USH2AO75445 RNA5SP24-201ENST00000516478 95 ntBASIC1.51□□□□□ -2.17
USH2AO75445 AC127502.3-201ENST00000636170 1206 ntBASIC1.51□□□□□ -2.17
USH2AO75445 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC1.51□□□□□ -2.17
USH2AO75445 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
USH2AO75445 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
USH2AO75445 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 AL672296.1-201ENST00000427780 2158 ntBASIC1.5□□□□□ -2.17
USH2AO75445 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC1.5□□□□□ -2.17
USH2AO75445 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC1.5□□□□□ -2.17
USH2AO75445 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC1.5□□□□□ -2.17
USH2AO75445 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
USH2AO75445 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC1.5□□□□□ -2.17
USH2AO75445 SNORA7.4-201ENST00000384249 137 ntBASIC1.5□□□□□ -2.17
USH2AO75445 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
USH2AO75445 DPPA2P2-201ENST00000418220 897 ntBASIC1.5□□□□□ -2.17
USH2AO75445 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC1.5□□□□□ -2.17
USH2AO75445 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC1.5□□□□□ -2.17
USH2AO75445 OR2AH1P-201ENST00000425717 928 ntBASIC1.5□□□□□ -2.17
USH2AO75445 AC009414.1-201ENST00000427200 443 ntBASIC1.5□□□□□ -2.17
USH2AO75445 AL590103.1-201ENST00000434488 307 ntBASIC1.5□□□□□ -2.17
USH2AO75445 RPL23AP23-201ENST00000452590 471 ntBASIC1.5□□□□□ -2.17
USH2AO75445 AC108210.2-201ENST00000503681 201 ntBASIC1.5□□□□□ -2.17
USH2AO75445 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC1.5□□□□□ -2.17
USH2AO75445 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.5□□□□□ -2.17
USH2AO75445 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC1.5□□□□□ -2.17
USH2AO75445 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.5□□□□□ -2.17
USH2AO75445 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
USH2AO75445 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
USH2AO75445 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
USH2AO75445 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC1.5□□□□□ -2.17
USH2AO75445 DMD-205ENST00000359836 7339 ntTSL 5 BASIC1.5□□□□□ -2.17
USH2AO75445 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC1.5□□□□□ -2.17
USH2AO75445 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 AC005005.4-201ENST00000623789 16698 ntBASIC1.5□□□□□ -2.17
USH2AO75445 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 RNA5SP229-201ENST00000410809 99 ntBASIC1.5□□□□□ -2.17
USH2AO75445 SNORD109B-201ENST00000458961 67 ntBASIC1.5□□□□□ -2.17
USH2AO75445 SNORD109A-201ENST00000459128 67 ntBASIC1.5□□□□□ -2.17
USH2AO75445 AC078785.3-201ENST00000476607 425 ntBASIC1.5□□□□□ -2.17
USH2AO75445 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC1.5□□□□□ -2.17
USH2AO75445 AC078899.3-201ENST00000599065 212 ntBASIC1.5□□□□□ -2.17
USH2AO75445 AC128687.2-201ENST00000609657 566 ntBASIC1.5□□□□□ -2.17
USH2AO75445 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC1.5□□□□□ -2.17
USH2AO75445 AC069209.1-201ENST00000619282 651 ntBASIC1.5□□□□□ -2.17
USH2AO75445 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
USH2AO75445 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
USH2AO75445 RNU1-18P-201ENST00000363062 164 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms