Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RNU6-202P-201ENST00000515998 96 ntBASIC4.04□□□□□ -1.76
SNX3O60493 RNU7-143P-201ENST00000516781 65 ntBASIC4.04□□□□□ -1.76
SNX3O60493 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX3O60493 AC023632.1-201ENST00000518463 375 ntBASIC4.04□□□□□ -1.76
SNX3O60493 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.04□□□□□ -1.76
SNX3O60493 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX3O60493 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.04□□□□□ -1.76
SNX3O60493 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SNX3O60493 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX3O60493 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX3O60493 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.04□□□□□ -1.76
SNX3O60493 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX3O60493 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.04□□□□□ -1.76
SNX3O60493 AC022968.1-201ENST00000567372 442 ntBASIC4.04□□□□□ -1.76
SNX3O60493 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.04□□□□□ -1.76
SNX3O60493 MIR4666A-201ENST00000580160 79 ntBASIC4.04□□□□□ -1.76
SNX3O60493 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX3O60493 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SNX3O60493 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX3O60493 AC020910.2-201ENST00000603635 610 ntBASIC4.04□□□□□ -1.76
SNX3O60493 AP005137.2-201ENST00000609238 400 ntBASIC4.04□□□□□ -1.76
SNX3O60493 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SNX3O60493 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX3O60493 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNX3O60493 AC007529.1-201ENST00000418574 2178 ntBASIC4.04□□□□□ -1.76
SNX3O60493 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SNX3O60493 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
SNX3O60493 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
SNX3O60493 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX3O60493 CR381670.1-201ENST00000624291 1693 ntBASIC4.03□□□□□ -1.76
SNX3O60493 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX3O60493 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX3O60493 A2MP1-204ENST00000566278 4130 ntBASIC4.03□□□□□ -1.76
SNX3O60493 ZNF29P-201ENST00000225587 168 ntBASIC4.03□□□□□ -1.76
SNX3O60493 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SNX3O60493 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.03□□□□□ -1.76
SNX3O60493 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX3O60493 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX3O60493 RNU6-171P-201ENST00000384354 107 ntBASIC4.03□□□□□ -1.76
SNX3O60493 SNORA11F-201ENST00000408237 128 ntBASIC4.03□□□□□ -1.76
SNX3O60493 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX3O60493 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX3O60493 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX3O60493 AL157831.1-201ENST00000426134 473 ntBASIC4.03□□□□□ -1.76
SNX3O60493 MTCYBP32-201ENST00000427945 1084 ntBASIC4.03□□□□□ -1.76
SNX3O60493 AC114973.1-201ENST00000429057 632 ntBASIC4.03□□□□□ -1.76
SNX3O60493 RBMY2QP-201ENST00000429799 1147 ntBASIC4.03□□□□□ -1.76
SNX3O60493 AL512326.1-201ENST00000443050 721 ntBASIC4.03□□□□□ -1.76
SNX3O60493 AL606517.1-201ENST00000446914 387 ntBASIC4.03□□□□□ -1.76
SNX3O60493 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SNX3O60493 AL031313.1-201ENST00000448435 256 ntBASIC4.03□□□□□ -1.76
SNX3O60493 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX3O60493 AC016724.1-201ENST00000453215 421 ntBASIC4.03□□□□□ -1.76
SNX3O60493 MRPL42P4-201ENST00000453267 443 ntBASIC4.03□□□□□ -1.76
SNX3O60493 DUXAP8-207ENST00000456786 622 ntBASIC4.03□□□□□ -1.76
SNX3O60493 RN7SL738P-201ENST00000470264 297 ntBASIC4.03□□□□□ -1.76
SNX3O60493 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX3O60493 AC106872.2-201ENST00000494303 480 ntBASIC4.03□□□□□ -1.76
SNX3O60493 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX3O60493 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX3O60493 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX3O60493 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX3O60493 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX3O60493 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX3O60493 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX3O60493 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX3O60493 OR10V3P-201ENST00000525712 725 ntBASIC4.03□□□□□ -1.76
SNX3O60493 OR5AZ1P-201ENST00000527448 943 ntBASIC4.03□□□□□ -1.76
SNX3O60493 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX3O60493 OR5AN2P-201ENST00000534535 896 ntBASIC4.03□□□□□ -1.76
SNX3O60493 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX3O60493 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX3O60493 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX3O60493 RPL23AP87-202ENST00000573039 466 ntBASIC4.03□□□□□ -1.76
SNX3O60493 AC099489.2-201ENST00000574976 260 ntBASIC4.03□□□□□ -1.76
SNX3O60493 AC090312.1-201ENST00000580637 348 ntBASIC4.03□□□□□ -1.76
SNX3O60493 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.03□□□□□ -1.76
SNX3O60493 AC017100.2-201ENST00000584628 355 ntBASIC4.03□□□□□ -1.76
SNX3O60493 AL445435.1-201ENST00000604232 665 ntBASIC4.03□□□□□ -1.76
SNX3O60493 SUMO2P15-201ENST00000604285 278 ntBASIC4.03□□□□□ -1.76
SNX3O60493 AL034351.1-201ENST00000605288 668 ntBASIC4.03□□□□□ -1.76
SNX3O60493 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX3O60493 AC009237.15-201ENST00000610252 501 ntBASIC4.03□□□□□ -1.76
SNX3O60493 DUXAP10-204ENST00000612052 616 ntBASIC4.03□□□□□ -1.76
SNX3O60493 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX3O60493 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX3O60493 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX3O60493 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX3O60493 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
SNX3O60493 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX3O60493 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX3O60493 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
SNX3O60493 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
SNX3O60493 AC005261.4-201ENST00000600047 1385 ntBASIC4.02□□□□□ -1.77
SNX3O60493 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNX3O60493 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
SNX3O60493 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
SNX3O60493 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNX3O60493 MIR331-201ENST00000362302 94 ntBASIC4.02□□□□□ -1.77
SNX3O60493 RNA5SP305-201ENST00000362665 119 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms