Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PRKNO60260 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.05□□□□□ -1.76
PRKNO60260 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.05□□□□□ -1.76
PRKNO60260 EIF2AP4-201ENST00000424793 1781 ntBASIC4.05□□□□□ -1.76
PRKNO60260 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PRKNO60260 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.05□□□□□ -1.76
PRKNO60260 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PRKNO60260 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PRKNO60260 Y_RNA.465-201ENST00000384293 102 ntBASIC4.05□□□□□ -1.76
PRKNO60260 RAB28P1-201ENST00000411517 641 ntBASIC4.05□□□□□ -1.76
PRKNO60260 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.05□□□□□ -1.76
PRKNO60260 AC099336.2-201ENST00000422457 254 ntBASIC4.05□□□□□ -1.76
PRKNO60260 AC234779.1-201ENST00000425910 285 ntBASIC4.05□□□□□ -1.76
PRKNO60260 MTCO3P21-201ENST00000430791 643 ntBASIC4.05□□□□□ -1.76
PRKNO60260 RPL23AP25-201ENST00000430973 463 ntBASIC4.05□□□□□ -1.76
PRKNO60260 RPS24P8-201ENST00000431490 402 ntBASIC4.05□□□□□ -1.76
PRKNO60260 AC091390.1-201ENST00000433904 331 ntBASIC4.05□□□□□ -1.76
PRKNO60260 PPIAP13-201ENST00000434706 478 ntBASIC4.05□□□□□ -1.76
PRKNO60260 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.05□□□□□ -1.76
PRKNO60260 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.05□□□□□ -1.76
PRKNO60260 YWHAQP9-201ENST00000445891 512 ntBASIC4.05□□□□□ -1.76
PRKNO60260 HMGB1P16-201ENST00000447155 540 ntBASIC4.05□□□□□ -1.76
PRKNO60260 RPS27AP15-201ENST00000447672 466 ntBASIC4.05□□□□□ -1.76
PRKNO60260 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PRKNO60260 ART2BP-201ENST00000453501 499 ntBASIC4.05□□□□□ -1.76
PRKNO60260 AC099560.2-201ENST00000457554 255 ntBASIC4.05□□□□□ -1.76
PRKNO60260 RN7SL303P-201ENST00000469773 251 ntBASIC4.05□□□□□ -1.76
PRKNO60260 AC109327.1-201ENST00000471666 403 ntBASIC4.05□□□□□ -1.76
PRKNO60260 AC011979.1-201ENST00000472300 483 ntBASIC4.05□□□□□ -1.76
PRKNO60260 AC090013.1-201ENST00000485147 480 ntBASIC4.05□□□□□ -1.76
PRKNO60260 AC041039.1-201ENST00000485656 536 ntBASIC4.05□□□□□ -1.76
PRKNO60260 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.05□□□□□ -1.76
PRKNO60260 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PRKNO60260 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.05□□□□□ -1.76
PRKNO60260 IGKV2-36-201ENST00000519999 223 ntBASIC4.05□□□□□ -1.76
PRKNO60260 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.05□□□□□ -1.76
PRKNO60260 AP000926.4-201ENST00000527351 454 ntBASIC4.05□□□□□ -1.76
PRKNO60260 MTND2P26-201ENST00000528255 1029 ntBASIC4.05□□□□□ -1.76
PRKNO60260 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.05□□□□□ -1.76
PRKNO60260 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.05□□□□□ -1.76
PRKNO60260 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.05□□□□□ -1.76
PRKNO60260 AC090515.3-201ENST00000560431 315 ntBASIC4.05□□□□□ -1.76
PRKNO60260 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.05□□□□□ -1.76
PRKNO60260 MIR3912-201ENST00000577566 105 ntBASIC4.05□□□□□ -1.76
PRKNO60260 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.05□□□□□ -1.76
PRKNO60260 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.05□□□□□ -1.76
PRKNO60260 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.05□□□□□ -1.76
PRKNO60260 AL590392.1-201ENST00000604960 446 ntBASIC4.05□□□□□ -1.76
PRKNO60260 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.05□□□□□ -1.76
PRKNO60260 AC023509.5-201ENST00000617434 807 ntBASIC4.05□□□□□ -1.76
PRKNO60260 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PRKNO60260 AC026422.1-201ENST00000623961 452 ntBASIC4.05□□□□□ -1.76
PRKNO60260 AC007546.2-201ENST00000623996 360 ntBASIC4.05□□□□□ -1.76
PRKNO60260 MIR6830-201ENST00000636015 70 ntBASIC4.05□□□□□ -1.76
PRKNO60260 MIR1322-201ENST00000638013 71 ntBASIC4.05□□□□□ -1.76
PRKNO60260 AL451142.2-201ENST00000429076 2090 ntBASIC4.05□□□□□ -1.76
PRKNO60260 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PRKNO60260 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PRKNO60260 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PRKNO60260 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PRKNO60260 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PRKNO60260 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PRKNO60260 AP001642.1-201ENST00000624727 2117 ntBASIC4.04□□□□□ -1.76
PRKNO60260 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PRKNO60260 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.04□□□□□ -1.76
PRKNO60260 PHKBP1-201ENST00000450951 1951 ntBASIC4.04□□□□□ -1.76
PRKNO60260 AL158163.1-201ENST00000603915 1649 ntBASIC4.04□□□□□ -1.76
PRKNO60260 OR5H2-201ENST00000355273 945 ntBASIC4.04□□□□□ -1.76
PRKNO60260 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PRKNO60260 RNA5SP307-201ENST00000362863 116 ntBASIC4.04□□□□□ -1.76
PRKNO60260 SNORD113-6-201ENST00000363345 75 ntBASIC4.04□□□□□ -1.76
PRKNO60260 RNU1-132P-201ENST00000364300 164 ntBASIC4.04□□□□□ -1.76
PRKNO60260 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.04□□□□□ -1.76
PRKNO60260 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PRKNO60260 SNORD116-8-201ENST00000384365 95 ntBASIC4.04□□□□□ -1.76
PRKNO60260 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.04□□□□□ -1.76
PRKNO60260 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PRKNO60260 SNORA11F-201ENST00000408237 128 ntBASIC4.04□□□□□ -1.76
PRKNO60260 AC011933.1-201ENST00000413334 321 ntBASIC4.04□□□□□ -1.76
PRKNO60260 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.04□□□□□ -1.76
PRKNO60260 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.04□□□□□ -1.76
PRKNO60260 MFSD13B-201ENST00000420133 1290 ntBASIC4.04□□□□□ -1.76
PRKNO60260 AC062016.2-201ENST00000420950 676 ntBASIC4.04□□□□□ -1.76
PRKNO60260 USP9YP11-201ENST00000427537 717 ntBASIC4.04□□□□□ -1.76
PRKNO60260 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.04□□□□□ -1.76
PRKNO60260 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.04□□□□□ -1.76
PRKNO60260 AC092809.1-201ENST00000441469 474 ntBASIC4.04□□□□□ -1.76
PRKNO60260 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.04□□□□□ -1.76
PRKNO60260 PTMAP3-201ENST00000447474 330 ntBASIC4.04□□□□□ -1.76
PRKNO60260 TPT1P12-201ENST00000448968 492 ntBASIC4.04□□□□□ -1.76
PRKNO60260 AC104978.1-201ENST00000449387 391 ntBASIC4.04□□□□□ -1.76
PRKNO60260 AC079776.3-201ENST00000450665 370 ntBASIC4.04□□□□□ -1.76
PRKNO60260 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.04□□□□□ -1.76
PRKNO60260 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.04□□□□□ -1.76
PRKNO60260 AC116533.1-201ENST00000459748 321 ntBASIC4.04□□□□□ -1.76
PRKNO60260 AL161747.1-201ENST00000480068 358 ntBASIC4.04□□□□□ -1.76
PRKNO60260 RPS3AP22-201ENST00000488297 769 ntBASIC4.04□□□□□ -1.76
PRKNO60260 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.04□□□□□ -1.76
PRKNO60260 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.04□□□□□ -1.76
PRKNO60260 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms