Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC012254.4-201ENST00000588843 273 ntBASIC4.58□□□□□ -1.68
SMAD6O43541 AL590229.1-201ENST00000603497 542 ntBASIC4.58□□□□□ -1.68
SMAD6O43541 AL356218.2-201ENST00000605264 187 ntBASIC4.58□□□□□ -1.68
SMAD6O43541 COX6CP4-201ENST00000605798 228 ntBASIC4.58□□□□□ -1.68
SMAD6O43541 AC097505.1-201ENST00000610199 565 ntBASIC4.58□□□□□ -1.68
SMAD6O43541 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.58□□□□□ -1.68
SMAD6O43541 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SMAD6O43541 Z69908.1-201ENST00000622603 247 ntBASIC4.58□□□□□ -1.68
SMAD6O43541 AL359715.5-201ENST00000623431 443 ntBASIC4.58□□□□□ -1.68
SMAD6O43541 AC010608.2-201ENST00000624830 470 ntBASIC4.58□□□□□ -1.68
SMAD6O43541 OR5BE1P-202ENST00000641168 1176 ntBASIC4.58□□□□□ -1.68
SMAD6O43541 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SMAD6O43541 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SMAD6O43541 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SMAD6O43541 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SMAD6O43541 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SMAD6O43541 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.58□□□□□ -1.68
SMAD6O43541 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SMAD6O43541 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SMAD6O43541 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SMAD6O43541 LINC00622-201ENST00000562811 1570 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SMAD6O43541 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.57□□□□□ -1.68
SMAD6O43541 AL133268.1-201ENST00000405676 1401 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SMAD6O43541 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SMAD6O43541 AC104446.1-201ENST00000613728 1321 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SMAD6O43541 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SMAD6O43541 FAM133CP-201ENST00000332869 704 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 RNU6-1251P-201ENST00000364502 107 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 RNU5A-2P-201ENST00000384337 116 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 MIR92A2-201ENST00000385299 75 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 HMGB1P10-201ENST00000395823 563 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 RPS24P12-201ENST00000402084 394 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 AL450992.3-201ENST00000413192 568 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 XKRYP4-201ENST00000414395 483 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 P2RY10P2-201ENST00000416730 913 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 AL356387.2-201ENST00000422272 243 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 AL592293.2-201ENST00000422292 996 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 Z74021.1-201ENST00000423610 407 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 RWDD4P2-201ENST00000426392 563 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.57□□□□□ -1.68
SMAD6O43541 HMGB3P6-201ENST00000444896 598 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.57□□□□□ -1.68
SMAD6O43541 AL360221.1-201ENST00000445989 335 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.57□□□□□ -1.68
SMAD6O43541 XKRYP5-201ENST00000449659 483 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 AC009961.3-201ENST00000449832 765 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.57□□□□□ -1.68
SMAD6O43541 NECAP1P2-201ENST00000455668 727 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.57□□□□□ -1.68
SMAD6O43541 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.57□□□□□ -1.68
SMAD6O43541 RN7SL860P-201ENST00000473738 223 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.57□□□□□ -1.68
SMAD6O43541 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.57□□□□□ -1.68
SMAD6O43541 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.57□□□□□ -1.68
SMAD6O43541 FABP5P12-201ENST00000515543 389 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.57□□□□□ -1.68
SMAD6O43541 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.57□□□□□ -1.68
SMAD6O43541 AC022880.1-201ENST00000534017 973 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.57□□□□□ -1.68
SMAD6O43541 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.57□□□□□ -1.68
SMAD6O43541 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.57□□□□□ -1.68
SMAD6O43541 AC021483.2-201ENST00000567415 758 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SMAD6O43541 AC022069.1-201ENST00000582910 658 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.57□□□□□ -1.68
SMAD6O43541 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.57□□□□□ -1.68
SMAD6O43541 AC090181.2-201ENST00000602975 672 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 AP001981.2-201ENST00000603241 418 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 AC005191.1-201ENST00000603950 358 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 AC016877.3-201ENST00000606778 504 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 AC005021.1-201ENST00000608730 355 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 AL445423.1-201ENST00000609941 536 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 AL392088.2-201ENST00000637607 285 ntBASIC4.57□□□□□ -1.68
SMAD6O43541 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SMAD6O43541 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.57□□□□□ -1.68
SMAD6O43541 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SMAD6O43541 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.57□□□□□ -1.68
SMAD6O43541 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SMAD6O43541 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.57□□□□□ -1.68
SMAD6O43541 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SMAD6O43541 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.56□□□□□ -1.68
SMAD6O43541 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SMAD6O43541 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SMAD6O43541 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
SMAD6O43541 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.56□□□□□ -1.68
SMAD6O43541 AL590084.1-201ENST00000407885 387 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 Y_RNA.604-201ENST00000410574 102 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 RN7SKP222-201ENST00000410651 315 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 AC004690.1-201ENST00000418216 328 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 AL139095.3-201ENST00000419672 1203 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 RPS12P5-201ENST00000423449 371 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 AL138785.1-201ENST00000425821 331 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 HIGD1AP12-201ENST00000427832 281 ntBASIC4.56□□□□□ -1.68
SMAD6O43541 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.56□□□□□ -1.68
SMAD6O43541 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.56□□□□□ -1.68
SMAD6O43541 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms