Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 MTND5P29-201ENST00000458676 1807 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 SNORA71.2-201ENST00000364941 134 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 Y_RNA.553-201ENST00000384670 102 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 RNA5SP372-201ENST00000390836 115 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 TMSB4XP8-201ENST00000402089 135 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AL133270.1-201ENST00000402635 279 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 SNORA74C-2-201ENST00000411179 201 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 TMSB4XP6-201ENST00000415187 135 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AC006366.1-201ENST00000422002 759 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 TMSB4XP1-201ENST00000424567 135 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AL050321.1-201ENST00000432363 400 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 RPL12P18-201ENST00000437175 325 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 PPIAP17-201ENST00000438507 471 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 UBE2V1P5-201ENST00000440070 405 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AC104306.1-201ENST00000449702 371 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 MTCO3P11-201ENST00000455103 774 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 SETP11-201ENST00000473027 690 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AC108022.1-201ENST00000493466 478 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AC107401.1-201ENST00000503426 685 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AC021146.3-201ENST00000511911 260 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AC091965.2-201ENST00000512324 613 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AC106038.2-201ENST00000520706 568 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AC092851.1-201ENST00000535964 478 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 GTF2IP8-201ENST00000560687 584 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AGGF1P4-201ENST00000568249 801 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AC016839.1-201ENST00000578162 867 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AC115286.1-201ENST00000604298 434 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AC092184.1-201ENST00000625042 715 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AC108467.2-201ENST00000617640 1597 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 VPS35P1-201ENST00000563400 1518 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 DHX40P1-201ENST00000588725 1412 ntBASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TCRBV5S1A1TA0A578 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
TCRBV5S1A1TA0A578 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TCRBV5S1A1TA0A578 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.71□□□□□ -1.65
TCRBV5S1A1TA0A578 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 RLIMP2-201ENST00000427891 1563 ntBASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 AC068870.3-201ENST00000625077 2536 ntBASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 RNA5SP307-201ENST00000362863 116 ntBASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 RNU6-621P-201ENST00000364752 109 ntBASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 AC004022.2-201ENST00000413824 193 ntBASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 AL139095.3-201ENST00000419672 1203 ntBASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 OR5BE1P-201ENST00000425977 939 ntBASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 Z93242.1-201ENST00000427102 353 ntBASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 AC022022.1-201ENST00000430304 178 ntBASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 MED14P1-201ENST00000430517 648 ntBASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 RPEP2-201ENST00000432149 701 ntBASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 AC092809.1-201ENST00000441469 474 ntBASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 RPS7P5-201ENST00000441482 581 ntBASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 AP000936.2-201ENST00000447151 681 ntBASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 AC005008.1-201ENST00000456151 612 ntBASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 RN7SL346P-201ENST00000491561 294 ntBASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.71□□□□□ -1.66
TCRBV5S1A1TA0A578 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms