Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AL391994.1-201ENST00000254724 282 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 Y_RNA.3-201ENST00000362331 103 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 RNVU1-6-201ENST00000364688 164 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 Y_RNA.517-201ENST00000384551 106 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 MIR525-201ENST00000384978 85 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 MIR320B1-201ENST00000390209 79 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 RPL12P9-201ENST00000412942 488 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AC013404.1-201ENST00000413068 249 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AL358176.3-201ENST00000420757 454 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AL022400.1-201ENST00000423946 935 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 CENPIP1-201ENST00000425713 902 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 USP9YP31-201ENST00000431405 881 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 GTF2IP7-202ENST00000436677 309 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AL450023.3-201ENST00000440592 271 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 RHEBP2-201ENST00000450289 600 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AC009220.1-201ENST00000451614 275 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AL691482.1-201ENST00000453255 87 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 PSMC1P13-201ENST00000458195 985 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 RPL23AP56-201ENST00000460778 453 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 APOOP2-201ENST00000461561 539 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 IGLV2-34-201ENST00000490007 283 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AC011005.3-201ENST00000491624 395 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 WBP1LP4-201ENST00000505043 344 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 MTATP6P22-201ENST00000507369 598 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 LTV1P1-201ENST00000510683 1237 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AC010587.2-201ENST00000511727 448 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 RNU6-678P-201ENST00000516832 109 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AP000873.5-201ENST00000533906 236 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AC025260.1-201ENST00000548858 430 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AL121834.1-201ENST00000572284 509 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 WISP1-OT1-201ENST00000602893 642 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 FAM27B-201ENST00000610601 213 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AP000346.3-201ENST00000622821 210 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 AL137100.1-201ENST00000556703 1620 ntBASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTDP1Q9Y5B0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 CYP1D1P-201ENST00000416662 1433 ntBASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 AC005832.2-201ENST00000538921 1430 ntBASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 AC114546.3-201ENST00000623582 1734 ntBASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 AC011155.1-201ENST00000316512 456 ntBASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 RNU6-707P-201ENST00000364647 95 ntBASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 RNA5SP505-201ENST00000364748 108 ntBASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 MIR141-201ENST00000384975 95 ntBASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 RN7SKP100-201ENST00000411258 284 ntBASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 RNA5SP498-201ENST00000411342 120 ntBASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 CEACAMP8-201ENST00000413902 580 ntBASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 AL590103.1-201ENST00000434488 307 ntBASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 MTND1P4-201ENST00000435196 415 ntBASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 RPS24P1-201ENST00000438550 371 ntBASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 AL353093.1-201ENST00000441292 436 ntBASIC5.65□□□□□ -1.5
CTDP1Q9Y5B0 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms