Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
DTX4Q9Y2E6 AL445523.1-201ENST00000451184 1362 ntBASIC4.51□□□□□ -1.69
DTX4Q9Y2E6 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
DTX4Q9Y2E6 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.51□□□□□ -1.69
DTX4Q9Y2E6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 ASNSP1-201ENST00000518311 1939 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AL391994.1-201ENST00000254724 282 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 Y_RNA.318-201ENST00000365131 97 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 U3.30-201ENST00000391308 210 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 TPT1P2-201ENST00000413105 503 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 HSFY4P-201ENST00000415994 1181 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 OR2B7P-201ENST00000429302 934 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AC010881.1-201ENST00000433830 235 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 MTND1P29-201ENST00000448112 647 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 OR52J1P-201ENST00000450596 932 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AC133473.1-201ENST00000455173 299 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 RPS15AP1-201ENST00000457423 391 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 RPL21P71-201ENST00000465598 459 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 NCOR1P1-202ENST00000486162 291 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 GAPDHP56-201ENST00000506031 988 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AC117532.1-201ENST00000514638 323 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 SNORA48.10-201ENST00000516965 160 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 RNU6-1261P-201ENST00000517194 104 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 HMGB3P26-201ENST00000560051 582 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AC018552.3-201ENST00000567416 561 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 MIR4480-201ENST00000582492 71 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AL031320.1-201ENST00000604177 357 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AC006270.3-201ENST00000605967 1036 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AC072039.2-201ENST00000608883 439 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AC007497.1-201ENST00000610421 561 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AC015908.5-201ENST00000623289 343 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AF246928.1-201ENST00000623768 87 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AC073530.2-201ENST00000623987 261 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 AC026634.1-201ENST00000634369 198 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 MTND4P26-201ENST00000415971 1359 ntBASIC4.5□□□□□ -1.69
DTX4Q9Y2E6 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 CDR1-202ENST00000625883 1485 ntBASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 AC068254.2-201ENST00000623938 3577 ntBASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 RNU6-253P-201ENST00000384730 105 ntBASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 AC068533.2-201ENST00000411872 306 ntBASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 AC092634.6-201ENST00000418558 192 ntBASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 RGS17P1-201ENST00000423358 553 ntBASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 AL645608.4-201ENST00000423619 154 ntBASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 AC092162.1-201ENST00000432828 434 ntBASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 RPS25P9-201ENST00000435591 252 ntBASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 GSTA7P-201ENST00000438425 448 ntBASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 AC241584.1-201ENST00000438469 1241 ntBASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.49□□□□□ -1.69
DTX4Q9Y2E6 ELOCP8-201ENST00000439309 332 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms