Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 OR4G2P-202ENST00000641004 1759 ntBASIC6.99□□□□□ -1.29
LHX6Q9UPM6 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 AC015871.3-201ENST00000618835 2261 ntBASIC6.99□□□□□ -1.29
LHX6Q9UPM6 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LHX6Q9UPM6 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 HLF-210ENST00000575345 3589 ntTSL 2 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 Y_RNA.272-201ENST00000364696 102 ntBASIC6.98□□□□□ -1.29
LHX6Q9UPM6 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 FAUP2-201ENST00000394301 401 ntBASIC6.98□□□□□ -1.29
LHX6Q9UPM6 MTCYBP2-201ENST00000407745 171 ntBASIC6.98□□□□□ -1.29
LHX6Q9UPM6 EI24P1-201ENST00000416584 867 ntBASIC6.98□□□□□ -1.29
LHX6Q9UPM6 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 AL451074.4-201ENST00000447545 470 ntBASIC6.98□□□□□ -1.29
LHX6Q9UPM6 CFL1P4-201ENST00000451536 498 ntBASIC6.98□□□□□ -1.29
LHX6Q9UPM6 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 PDCD5P2-201ENST00000507570 312 ntBASIC6.98□□□□□ -1.29
LHX6Q9UPM6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 AL133271.1-201ENST00000538229 291 ntBASIC6.98□□□□□ -1.29
LHX6Q9UPM6 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 CUX2P1-201ENST00000606426 298 ntBASIC6.98□□□□□ -1.29
LHX6Q9UPM6 AP001784.1-201ENST00000624107 428 ntBASIC6.98□□□□□ -1.29
LHX6Q9UPM6 AC233280.20-201ENST00000637412 416 ntBASIC6.98□□□□□ -1.29
LHX6Q9UPM6 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 LRRC2-AS1-201ENST00000599511 2291 ntBASIC6.98□□□□□ -1.29
LHX6Q9UPM6 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
LHX6Q9UPM6 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AC018992.1-201ENST00000523778 2149 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 RNU4-44P-201ENST00000363050 141 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 Y_RNA.261-201ENST00000364631 102 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 RNU6-290P-201ENST00000365212 101 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 Y_RNA.400-201ENST00000383963 111 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 Y_RNA.435-201ENST00000384095 112 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AL355862.1-201ENST00000412705 353 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 TRAPPC2P4-201ENST00000421750 331 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 MTCO1P5-201ENST00000433573 344 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 FABP5P13-201ENST00000452144 328 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 PLGLA-201ENST00000465668 449 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms