Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 RNF19BPX-201ENST00000426224 625 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AL591623.2-201ENST00000449978 222 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 RPL5P16-201ENST00000471467 790 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 MTCO3P22-201ENST00000603219 784 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AC006946.3-201ENST00000609791 756 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AC244517.3-201ENST00000616254 1235 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 MIR4727-201ENST00000622232 55 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AL353684.1-201ENST00000622677 1120 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AC110801.1-201ENST00000623590 212 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 Z83843.1-201ENST00000604070 3685 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AC119744.1-201ENST00000454746 1715 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AC068647.1-201ENST00000489539 2265 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 OR1AA1P-201ENST00000419597 916 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 USP9YP36-201ENST00000424581 829 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 USP9YP31-201ENST00000431405 881 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 RN7SL429P-201ENST00000479090 223 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 RN7SL489P-201ENST00000486185 223 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 RN7SL327P-201ENST00000488659 223 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AC026333.2-201ENST00000542164 106 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AC092868.3-201ENST00000560515 784 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AC124312.4-201ENST00000605533 310 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 BRDTP1-201ENST00000605735 677 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AC015802.5-201ENST00000607478 399 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 RN7SL853P-201ENST00000617250 223 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AC079298.2-201ENST00000623885 459 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AC119674.1-212ENST00000641155 993 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SCN11AQ9UI33 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCN11AQ9UI33 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.36□□□□□ -1.71
SCN11AQ9UI33 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCN11AQ9UI33 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCN11AQ9UI33 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCN11AQ9UI33 AC024341.1-201ENST00000526444 1552 ntBASIC4.36□□□□□ -1.71
SCN11AQ9UI33 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCN11AQ9UI33 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCN11AQ9UI33 UBA52P6-201ENST00000399822 382 ntBASIC4.36□□□□□ -1.71
SCN11AQ9UI33 ATP5C1P1-201ENST00000441945 895 ntBASIC4.36□□□□□ -1.71
SCN11AQ9UI33 RN7SL93P-201ENST00000463035 293 ntBASIC4.36□□□□□ -1.71
SCN11AQ9UI33 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
SCN11AQ9UI33 HIGD1AP1-201ENST00000550979 275 ntBASIC4.36□□□□□ -1.71
SCN11AQ9UI33 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.36□□□□□ -1.71
SCN11AQ9UI33 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.36□□□□□ -1.71
SCN11AQ9UI33 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCN11AQ9UI33 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SCN11AQ9UI33 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.36□□□□□ -1.71
SCN11AQ9UI33 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.35□□□□□ -1.71
SCN11AQ9UI33 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.35□□□□□ -1.71
SCN11AQ9UI33 U3.19-201ENST00000390893 196 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 HMGN2P8-201ENST00000391458 268 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 AL160275.2-201ENST00000412010 394 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 MTND2P11-201ENST00000423638 648 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 RPS26P47-201ENST00000427219 348 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 AC025750.2-201ENST00000442609 450 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 NANOGNBP1-201ENST00000448444 480 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 RPS26P3-201ENST00000470205 348 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 AC004057.1-201ENST00000485827 348 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 AC096576.1-201ENST00000489014 359 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.35□□□□□ -1.71
SCN11AQ9UI33 APOOP4-201ENST00000513530 597 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 AC018442.3-201ENST00000523025 183 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 AC006539.2-201ENST00000601729 572 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCN11AQ9UI33 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.35□□□□□ -1.71
SCN11AQ9UI33 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCN11AQ9UI33 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.35□□□□□ -1.71
SCN11AQ9UI33 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCN11AQ9UI33 KPNA2P2-201ENST00000419546 1489 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 RNA5SP322-201ENST00000363617 119 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCN11AQ9UI33 AJ239321.1-201ENST00000424255 564 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 AL353705.1-201ENST00000433468 480 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 HMGB3P14-201ENST00000494195 599 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 RN7SL504P-201ENST00000494496 287 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.35□□□□□ -1.71
SCN11AQ9UI33 AC009237.17-201ENST00000618111 748 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 AC241377.1-201ENST00000619797 406 ntBASIC4.35□□□□□ -1.71
SCN11AQ9UI33 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SCN11AQ9UI33 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SCN11AQ9UI33 MTCO1P7-201ENST00000419523 1542 ntBASIC4.34□□□□□ -1.71
SCN11AQ9UI33 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms