Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC017099.1-201ENST00000448261 1028 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 RPL38P1-201ENST00000460914 211 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 AC104687.1-201ENST00000485829 412 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 HMGB1P21-201ENST00000502313 581 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 AC111193.1-201ENST00000504097 155 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 MTND3P24-201ENST00000506306 329 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 RNA5SP143-201ENST00000516936 115 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 OR5M7P-201ENST00000526140 972 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 AC025260.1-201ENST00000548858 430 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 POLR2KP1-201ENST00000553226 168 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 HSPE1P5-201ENST00000561489 272 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 AC079610.2-201ENST00000604818 690 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 uc_338.32-201ENST00000615087 172 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 AC019278.1-201ENST00000623516 479 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 RNU6-98P-201ENST00000384173 107 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AL590290.1-201ENST00000405336 380 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 MIR1179-201ENST00000408703 91 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AC023128.2-201ENST00000420880 1223 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 RPL17P35-201ENST00000432217 549 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 ARL4AP4-201ENST00000434170 518 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AC074367.1-201ENST00000438685 1125 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AL451050.1-201ENST00000450126 415 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 ABCF2P2-201ENST00000450549 296 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AC092045.1-201ENST00000495716 1231 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AC010285.3-201ENST00000511668 676 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 HNRNPKP5-201ENST00000515300 253 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 RN7SKP82-201ENST00000516786 223 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AC067852.4-201ENST00000590314 478 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AC079880.2-201ENST00000603790 1213 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AL031666.3-201ENST00000609320 1006 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AL445493.3-201ENST00000619568 477 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 CR392039.4-201ENST00000624968 501 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AL353743.4-201ENST00000422653 1547 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 AC016588.2-201ENST00000632484 3021 ntBASIC4.24□□□□□ -1.73
HPS4Q9NQG7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HPS4Q9NQG7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AC097504.1-201ENST00000515103 2415 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 PTMAP2-201ENST00000397627 327 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AC019070.1-201ENST00000415008 1024 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AL161631.1-201ENST00000417933 486 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AL121882.1-201ENST00000422893 417 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AL691449.1-201ENST00000426570 421 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 ELOCP18-201ENST00000434209 337 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 TBCAP1-201ENST00000436520 327 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms