Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 AL357515.1-201ENST00000402967 542 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 U3.32-201ENST00000408116 212 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 RNA5SP345-201ENST00000410646 108 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 AC099336.2-201ENST00000422457 254 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 AC016831.4-201ENST00000438302 307 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 RPL23AP15-201ENST00000450202 459 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 AC099560.2-201ENST00000457554 255 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 snoU13.1-201ENST00000459157 104 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 RPL12P20-201ENST00000475538 479 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 RPL7AP10-201ENST00000481016 791 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 AC080014.1-201ENST00000496877 1201 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 HMGB1P28-201ENST00000507778 552 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 AC111000.3-201ENST00000508057 576 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 AC016559.2-201ENST00000510759 359 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTA1Q9NP79 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 AC090515.3-201ENST00000560431 315 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 MTCYBP28-201ENST00000566728 1132 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 AC074051.3-201ENST00000570238 358 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 MIR4284-201ENST00000578924 81 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 FAM27B-201ENST00000610601 213 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 AC073114.1-201ENST00000612027 490 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 AL158063.1-201ENST00000615349 536 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
VTA1Q9NP79 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTA1Q9NP79 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTA1Q9NP79 AC093591.2-201ENST00000565254 3843 ntBASIC5.51□□□□□ -1.53
VTA1Q9NP79 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
VTA1Q9NP79 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 AL390237.1-201ENST00000404226 1415 ntBASIC5.5□□□□□ -1.53
VTA1Q9NP79 DHX40P1-201ENST00000588725 1412 ntBASIC5.5□□□□□ -1.53
VTA1Q9NP79 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 OR4K15-201ENST00000305051 1216 ntBASIC5.5□□□□□ -1.53
VTA1Q9NP79 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VTA1Q9NP79 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VTA1Q9NP79 SNORA62-201ENST00000365493 153 ntBASIC5.5□□□□□ -1.53
VTA1Q9NP79 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 AC073264.1-201ENST00000411508 416 ntBASIC5.5□□□□□ -1.53
VTA1Q9NP79 PIGPP2-201ENST00000411569 458 ntBASIC5.5□□□□□ -1.53
VTA1Q9NP79 AL136133.1-201ENST00000413694 376 ntBASIC5.5□□□□□ -1.53
VTA1Q9NP79 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 COX6CP17-201ENST00000421389 185 ntBASIC5.5□□□□□ -1.53
VTA1Q9NP79 AC009480.2-201ENST00000422916 432 ntBASIC5.5□□□□□ -1.53
VTA1Q9NP79 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 AC091390.1-201ENST00000433904 331 ntBASIC5.5□□□□□ -1.53
VTA1Q9NP79 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 TPT1P12-201ENST00000448968 492 ntBASIC5.5□□□□□ -1.53
VTA1Q9NP79 AC072039.1-201ENST00000477611 581 ntBASIC5.5□□□□□ -1.53
VTA1Q9NP79 RN7SL809P-201ENST00000482040 297 ntBASIC5.5□□□□□ -1.53
VTA1Q9NP79 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 RN7SKP92-201ENST00000517266 244 ntBASIC5.5□□□□□ -1.53
VTA1Q9NP79 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 AC092851.1-201ENST00000535964 478 ntBASIC5.5□□□□□ -1.53
VTA1Q9NP79 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VTA1Q9NP79 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 ZNF833P-201ENST00000424938 1494 ntBASIC5.5□□□□□ -1.53
VTA1Q9NP79 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VTA1Q9NP79 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.5□□□□□ -1.53
VTA1Q9NP79 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms