Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU2-8P-201ENST00000410727 190 ntBASIC5.75□□□□□ -1.49
SSU72Q9NP77 RPL35AP3-201ENST00000414680 288 ntBASIC5.75□□□□□ -1.49
SSU72Q9NP77 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 MYB-206ENST00000420123 1051 ntTSL 5 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 AL353777.1-201ENST00000425552 326 ntBASIC5.75□□□□□ -1.49
SSU72Q9NP77 NDUFB4P8-201ENST00000435351 367 ntBASIC5.75□□□□□ -1.49
SSU72Q9NP77 FAM103A2P-201ENST00000444122 354 ntBASIC5.75□□□□□ -1.49
SSU72Q9NP77 AC092601.1-201ENST00000444526 383 ntBASIC5.75□□□□□ -1.49
SSU72Q9NP77 OR7E116P-201ENST00000448529 957 ntBASIC5.75□□□□□ -1.49
SSU72Q9NP77 AL034369.1-201ENST00000453808 477 ntBASIC5.75□□□□□ -1.49
SSU72Q9NP77 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 AC063943.1-201ENST00000465434 453 ntBASIC5.75□□□□□ -1.49
SSU72Q9NP77 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 AC108693.1-201ENST00000496068 432 ntBASIC5.75□□□□□ -1.49
SSU72Q9NP77 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 AC125612.1-201ENST00000547580 377 ntBASIC5.75□□□□□ -1.49
SSU72Q9NP77 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.75□□□□□ -1.49
SSU72Q9NP77 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 BX664608.1-201ENST00000610519 487 ntBASIC5.75□□□□□ -1.49
SSU72Q9NP77 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SSU72Q9NP77 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSU72Q9NP77 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSU72Q9NP77 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSU72Q9NP77 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSU72Q9NP77 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 RNU6-1120P-201ENST00000362988 108 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 RNU6-984P-201ENST00000363236 109 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 PRELID1P1-201ENST00000403549 660 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 AL078604.1-201ENST00000404609 466 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 RPS7P15-201ENST00000415804 584 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 THEM7P-201ENST00000419556 672 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 GPM6BP2-201ENST00000432046 144 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 GPM6BP1-201ENST00000446387 144 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 AL136380.1-201ENST00000447970 162 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 AL445466.1-201ENST00000448432 357 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 Y_RNA.632-201ENST00000459189 102 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 RPL7P15-201ENST00000461190 712 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 RPL7P6-201ENST00000480903 738 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 RN7SKP116-201ENST00000516902 319 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 RNU6-1220P-201ENST00000517126 108 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 PSMA2P1-201ENST00000526365 646 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 AC091078.2-201ENST00000557145 559 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 AC099489.2-201ENST00000574976 260 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 MAGOH2P-202ENST00000584384 429 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 AC017100.2-201ENST00000584628 355 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 AC063977.7-201ENST00000594454 337 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 COX6CP7-201ENST00000597056 208 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 AC008638.3-201ENST00000603341 463 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 AP001437.1-201ENST00000608783 456 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 AC078899.5-201ENST00000612475 178 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSU72Q9NP77 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSU72Q9NP77 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSU72Q9NP77 MFSD8-219ENST00000641228 2559 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.74□□□□□ -1.49
SSU72Q9NP77 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSU72Q9NP77 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSU72Q9NP77 AC097504.1-201ENST00000515103 2415 ntBASIC5.74□□□□□ -1.49
SSU72Q9NP77 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSU72Q9NP77 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSU72Q9NP77 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSU72Q9NP77 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSU72Q9NP77 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.73□□□□□ -1.49
SSU72Q9NP77 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSU72Q9NP77 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms