Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 BNIP3P26-201ENST00000600827 554 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC130352.1-201ENST00000602979 661 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC009994.1-201ENST00000606889 253 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC090948.2-201ENST00000607363 564 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 Mico1.1-201ENST00000611698 204 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC104260.1-201ENST00000616660 539 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC006338.1-201ENST00000618453 749 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC073569.3-201ENST00000619055 682 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 DUXAP9-208ENST00000622815 614 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC025048.6-202ENST00000627667 438 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 CYP4F35P-202ENST00000636121 390 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC073869.10-201ENST00000642016 354 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD248Q9HCU0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD248Q9HCU0 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD248Q9HCU0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CD248Q9HCU0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
CD248Q9HCU0 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CD248Q9HCU0 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CD248Q9HCU0 AL450345.1-202ENST00000605741 3881 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CD248Q9HCU0 AL121886.1-201ENST00000358609 435 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 RNU6-146P-201ENST00000384602 108 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 AL589647.1-201ENST00000402485 466 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 MIR1277-201ENST00000408536 78 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 AC009480.2-201ENST00000422916 432 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 OR2AH1P-201ENST00000425717 928 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 TMEM183AP1-205ENST00000432739 290 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 AC000111.3-201ENST00000433478 193 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 AC073465.2-201ENST00000440938 498 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 GAPDHP25-201ENST00000447061 1001 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 AC073850.1-201ENST00000449243 255 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 AZGP1P2-201ENST00000454506 345 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 RPL7AP52-201ENST00000458096 790 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 RNU6-1218P-201ENST00000458990 108 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 RNU7-140P-201ENST00000459546 60 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 APOOP2-201ENST00000461561 539 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 HMGN1P10-201ENST00000474557 553 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 RPS18P6-201ENST00000476880 458 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 AC072039.1-201ENST00000477611 581 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 RPS23P1-201ENST00000491662 432 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 FAM92A1P2-202ENST00000504766 877 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 ARL4AP2-201ENST00000507378 601 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 AC008837.2-201ENST00000513076 418 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 AF186190.1-201ENST00000517470 480 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 OR5AL2P-201ENST00000532185 920 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 AP005403.1-201ENST00000579720 229 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 MIR4646-201ENST00000580775 63 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 RN7SL435P-201ENST00000584418 282 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CD248Q9HCU0 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 AP000907.4-201ENST00000604143 237 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.46□□□□□ -1.54
CD248Q9HCU0 AC012360.2-201ENST00000609349 391 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 AL136295.6-201ENST00000610486 658 ntBASIC5.46□□□□□ -1.54
CD248Q9HCU0 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CD248Q9HCU0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CD248Q9HCU0 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CD248Q9HCU0 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CD248Q9HCU0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CD248Q9HCU0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CD248Q9HCU0 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.45□□□□□ -1.54
CD248Q9HCU0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CD248Q9HCU0 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CD248Q9HCU0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
CD248Q9HCU0 MTND4P12-201ENST00000498999 1377 ntBASIC5.45□□□□□ -1.54
CD248Q9HCU0 AC017007.4-201ENST00000503353 1352 ntBASIC5.45□□□□□ -1.54
CD248Q9HCU0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CD248Q9HCU0 HSPA8P18-201ENST00000439846 1928 ntBASIC5.45□□□□□ -1.54
CD248Q9HCU0 OR10J6P-201ENST00000289731 930 ntBASIC5.45□□□□□ -1.54
CD248Q9HCU0 SNORA17.1-201ENST00000362945 126 ntBASIC5.45□□□□□ -1.54
CD248Q9HCU0 RNA5SP443-201ENST00000363083 132 ntBASIC5.45□□□□□ -1.54
CD248Q9HCU0 OR1L6-202ENST00000373684 1044 ntBASIC5.45□□□□□ -1.54
CD248Q9HCU0 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.45□□□□□ -1.54
CD248Q9HCU0 MIR181A1-201ENST00000385026 110 ntBASIC5.45□□□□□ -1.54
CD248Q9HCU0 RPL17P50-201ENST00000396131 546 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms