Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNA5SP326-201ENST00000363209 110 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 SNORD56.2-201ENST00000363242 71 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 Y_RNA.142-201ENST00000363491 102 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 Y_RNA.162-201ENST00000363683 102 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 Y_RNA.279-201ENST00000364763 95 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 RNU6-692P-201ENST00000384496 107 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC005042.1-201ENST00000393397 800 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 DNAJA1P4-201ENST00000406473 1166 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 RPS3AP2-201ENST00000407190 754 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AL359704.1-201ENST00000411586 781 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC093155.2-201ENST00000420734 937 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AL662874.1-201ENST00000426065 230 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC009961.2-201ENST00000435771 251 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 ARPC3P1-201ENST00000437218 533 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC002504.1-201ENST00000438281 691 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AL391987.1-201ENST00000441025 200 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AP000281.1-201ENST00000444036 316 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 Z82190.1-201ENST00000454534 490 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC099563.1-201ENST00000456086 418 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC087312.1-201ENST00000471411 480 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 KCTD9P2-201ENST00000512203 1013 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 Y_RNA.693-201ENST00000516641 110 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 IGLVIV-64-201ENST00000518581 301 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 PMS2P3-207ENST00000529061 717 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC022884.3-201ENST00000579571 248 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 MIR4307-201ENST00000582802 84 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC112187.2-201ENST00000604345 283 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 RN7SL787P-201ENST00000613000 284 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AL442067.2-201ENST00000614033 363 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC127024.6-201ENST00000621598 424 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC019278.1-201ENST00000623516 479 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 OR13C1P-202ENST00000641378 2919 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 FARSBP1-201ENST00000435808 1778 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 OR4F13P-202ENST00000560066 2054 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 SRRM1P3-201ENST00000426911 2678 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC092681.1-201ENST00000297369 291 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 SNORA63-201ENST00000363450 132 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 RNU6-777P-201ENST00000364265 104 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 RN7SKP269-201ENST00000365545 319 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 SNORA17A-201ENST00000391185 133 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC079809.1-201ENST00000415468 276 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 SPA17P1-201ENST00000416656 452 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms