Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.72
CCSER1Q9C0I3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
CCSER1Q9C0I3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCSER1Q9C0I3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 RN7SKP44-201ENST00000363602 316 ntBASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 AC010385.1-201ENST00000412374 256 ntBASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 TCEA1P4-201ENST00000415066 844 ntBASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 AL513343.1-201ENST00000451818 792 ntBASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 RPL23AP71-201ENST00000470966 469 ntBASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 AC108941.1-201ENST00000502853 530 ntBASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 AC010342.1-201ENST00000514047 877 ntBASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 AC004923.2-201ENST00000529649 369 ntBASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 AC025260.1-201ENST00000548858 430 ntBASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 AL121594.4-201ENST00000556211 1196 ntBASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 MIR4286-201ENST00000580651 93 ntBASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 AC053481.4-201ENST00000583164 216 ntBASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 HMGB1P50-201ENST00000605814 607 ntBASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 AC090617.9-201ENST00000623751 147 ntBASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCSER1Q9C0I3 AC106871.1-201ENST00000568324 3102 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AC100871.1-201ENST00000507871 1456 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AC095050.2-201ENST00000510748 1458 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AL031985.3-201ENST00000565390 2449 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AL049737.1-201ENST00000413920 1403 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 RNA5SP97-201ENST00000365006 84 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 HMGN2P8-201ENST00000391458 268 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 RN7SKP177-201ENST00000410567 355 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 RNU6-628P-201ENST00000410675 107 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 RAC1P3-201ENST00000416129 580 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 CYP4F29P-201ENST00000420685 446 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AC092809.1-201ENST00000441469 474 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AL645939.1-201ENST00000453429 797 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AC098824.1-201ENST00000453565 980 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 RPL30P11-201ENST00000495304 339 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 HMGB1P21-201ENST00000502313 581 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 SUMO2P20-201ENST00000520803 283 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 HAUS1P3-201ENST00000523909 662 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AC233266.2-201ENST00000567067 528 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 EIF1P6-201ENST00000600054 334 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AL137849.1-201ENST00000604767 169 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AL355802.4-201ENST00000607635 548 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 MIR486-1-201ENST00000612171 68 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AL118556.2-201ENST00000614375 824 ntBASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.32□□□□□ -1.72
CCSER1Q9C0I3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 AL136964.1-201ENST00000622038 2990 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 U3.15-201ENST00000365398 212 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 U1.1-201ENST00000384101 164 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 RNA5SP239-201ENST00000410218 129 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 UBE2V1P11-201ENST00000411559 285 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 TATDN1P1-201ENST00000414123 891 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 LINC01347-201ENST00000417964 355 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 IFNNP1-201ENST00000429219 553 ntBASIC4.31□□□□□ -1.72
CCSER1Q9C0I3 AC023347.2-201ENST00000433994 462 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms