Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.28□□□□□ -1.56
SCAPERQ9BY12 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC5.28□□□□□ -1.56
SCAPERQ9BY12 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SCAPERQ9BY12 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.27□□□□□ -1.57
SCAPERQ9BY12 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCAPERQ9BY12 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.27□□□□□ -1.57
SCAPERQ9BY12 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCAPERQ9BY12 ANKRD36P1-201ENST00000344424 659 ntBASIC5.27□□□□□ -1.57
SCAPERQ9BY12 RNU6-249P-201ENST00000363016 102 ntBASIC5.27□□□□□ -1.57
SCAPERQ9BY12 AL136131.1-201ENST00000406079 803 ntBASIC5.27□□□□□ -1.57
SCAPERQ9BY12 JKAMPP1-201ENST00000413804 919 ntBASIC5.27□□□□□ -1.57
SCAPERQ9BY12 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.27□□□□□ -1.57
SCAPERQ9BY12 LIPT1P1-201ENST00000415870 1186 ntBASIC5.27□□□□□ -1.57
SCAPERQ9BY12 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.27□□□□□ -1.57
SCAPERQ9BY12 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.27□□□□□ -1.57
SCAPERQ9BY12 NANOGNBP1-201ENST00000448444 480 ntBASIC5.27□□□□□ -1.57
SCAPERQ9BY12 HMGB1P21-201ENST00000502313 581 ntBASIC5.27□□□□□ -1.57
SCAPERQ9BY12 RNU6-579P-201ENST00000516879 102 ntBASIC5.27□□□□□ -1.57
SCAPERQ9BY12 AL360157.1-201ENST00000565962 87 ntBASIC5.27□□□□□ -1.57
SCAPERQ9BY12 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.27□□□□□ -1.57
SCAPERQ9BY12 AC084036.1-201ENST00000609190 508 ntBASIC5.27□□□□□ -1.57
SCAPERQ9BY12 AC127502.3-201ENST00000636170 1206 ntBASIC5.27□□□□□ -1.57
SCAPERQ9BY12 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC5.27□□□□□ -1.57
SCAPERQ9BY12 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SCAPERQ9BY12 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.27□□□□□ -1.57
SCAPERQ9BY12 AC004944.1-201ENST00000517807 3059 ntBASIC5.26□□□□□ -1.57
SCAPERQ9BY12 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SCAPERQ9BY12 Z83843.1-201ENST00000604070 3685 ntBASIC5.26□□□□□ -1.57
SCAPERQ9BY12 OR52B1P-201ENST00000316506 909 ntBASIC5.26□□□□□ -1.57
SCAPERQ9BY12 AC008065.1-201ENST00000428525 348 ntBASIC5.26□□□□□ -1.57
SCAPERQ9BY12 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SCAPERQ9BY12 HMGB3P22-202ENST00000451823 572 ntBASIC5.26□□□□□ -1.57
SCAPERQ9BY12 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.26□□□□□ -1.57
SCAPERQ9BY12 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.26□□□□□ -1.57
SCAPERQ9BY12 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.26□□□□□ -1.57
SCAPERQ9BY12 SULT1C2P2-201ENST00000562517 294 ntBASIC5.26□□□□□ -1.57
SCAPERQ9BY12 AC103858.2-201ENST00000621471 543 ntBASIC5.26□□□□□ -1.57
SCAPERQ9BY12 AL353684.1-201ENST00000622677 1120 ntBASIC5.26□□□□□ -1.57
SCAPERQ9BY12 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SCAPERQ9BY12 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SCAPERQ9BY12 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SCAPERQ9BY12 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SCAPERQ9BY12 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SCAPERQ9BY12 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SCAPERQ9BY12 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCAPERQ9BY12 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SCAPERQ9BY12 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.25□□□□□ -1.57
SCAPERQ9BY12 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.25□□□□□ -1.57
SCAPERQ9BY12 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.25□□□□□ -1.57
SCAPERQ9BY12 AC097262.1-201ENST00000452559 548 ntBASIC5.25□□□□□ -1.57
SCAPERQ9BY12 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.25□□□□□ -1.57
SCAPERQ9BY12 SYT14P1-201ENST00000481459 721 ntBASIC5.25□□□□□ -1.57
SCAPERQ9BY12 AC109458.1-201ENST00000508858 316 ntBASIC5.25□□□□□ -1.57
SCAPERQ9BY12 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.25□□□□□ -1.57
SCAPERQ9BY12 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.25□□□□□ -1.57
SCAPERQ9BY12 AC007656.2-201ENST00000624902 4547 ntBASIC5.25□□□□□ -1.57
SCAPERQ9BY12 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SCAPERQ9BY12 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
SCAPERQ9BY12 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC5.25□□□□□ -1.57
SCAPERQ9BY12 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SCAPERQ9BY12 MFSD8-233ENST00000641482 4860 ntBASIC5.25□□□□□ -1.57
SCAPERQ9BY12 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.25□□□□□ -1.57
SCAPERQ9BY12 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.25□□□□□ -1.57
SCAPERQ9BY12 AC018555.1-201ENST00000567548 1980 ntBASIC5.24□□□□□ -1.57
SCAPERQ9BY12 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.24□□□□□ -1.57
SCAPERQ9BY12 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
SCAPERQ9BY12 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCAPERQ9BY12 FCF1P8-201ENST00000510322 597 ntBASIC5.24□□□□□ -1.57
SCAPERQ9BY12 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC5.24□□□□□ -1.57
SCAPERQ9BY12 HIGD1AP3-201ENST00000515857 278 ntBASIC5.24□□□□□ -1.57
SCAPERQ9BY12 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.24□□□□□ -1.57
SCAPERQ9BY12 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.24□□□□□ -1.57
SCAPERQ9BY12 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.24□□□□□ -1.57
SCAPERQ9BY12 AC107294.1-201ENST00000609524 467 ntBASIC5.24□□□□□ -1.57
SCAPERQ9BY12 AL359715.5-201ENST00000623431 443 ntBASIC5.24□□□□□ -1.57
SCAPERQ9BY12 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.24□□□□□ -1.57
SCAPERQ9BY12 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCAPERQ9BY12 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCAPERQ9BY12 AC063979.1-201ENST00000415539 377 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 AL158071.1-201ENST00000430315 461 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 SEPT7P3-201ENST00000455017 621 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 RPS3AP43-201ENST00000479743 781 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 RPS6P4-201ENST00000494693 758 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.23□□□□□ -1.57
SCAPERQ9BY12 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC5.23□□□□□ -1.57
SCAPERQ9BY12 AC090281.1-201ENST00000523019 276 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 AP003392.5-201ENST00000607857 415 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.23□□□□□ -1.57
SCAPERQ9BY12 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCAPERQ9BY12 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC5.23□□□□□ -1.57
SCAPERQ9BY12 HSPA8P19-201ENST00000505359 1517 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCAPERQ9BY12 AC087190.4-201ENST00000574616 8334 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SCAPERQ9BY12 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCAPERQ9BY12 SNORA44-201ENST00000384584 132 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 UBE2V1P2-201ENST00000397758 440 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 AC006028.1-201ENST00000438379 402 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 AC025750.2-201ENST00000442609 450 ntBASIC5.23□□□□□ -1.57
SCAPERQ9BY12 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms