Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 SAGE3P-201ENST00000619800 1635 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 RNY1P12-201ENST00000364251 105 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 RNA5SP479-201ENST00000364858 117 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 Y_RNA.562-201ENST00000384695 113 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 MT-TW-201ENST00000387382 68 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 RNU6-823P-201ENST00000391042 103 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 TPMTP2-201ENST00000414372 726 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 AC007283.2-201ENST00000424739 197 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 AC126120.1-201ENST00000431082 470 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 RPS3AP54-201ENST00000435535 734 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 AC105402.2-201ENST00000438503 358 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 AC098831.1-201ENST00000440661 216 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 AC079168.1-201ENST00000458741 345 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 IGKV2D-10-201ENST00000520194 281 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 AP000857.1-201ENST00000532151 543 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 AC209154.1-201ENST00000582156 337 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 AL021879.1-201ENST00000611756 288 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 AC011890.2-201ENST00000613393 294 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 AP003175.1-201ENST00000641383 6658 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 AC034111.1-201ENST00000562143 3770 ntBASIC6.32□□□□□ -1.4
COL25A1Q9BXS0 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 MFSD8-218ENST00000641186 4448 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AL049634.1-201ENST00000453770 1720 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AL023806.3-201ENST00000638502 2704 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AC093775.1-201ENST00000624154 1868 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 OR51A10P-201ENST00000307165 937 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 Y_RNA.81-201ENST00000362997 102 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 Y_RNA.152-201ENST00000363578 100 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 SNORA70.2-201ENST00000364506 135 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 Y_RNA.477-201ENST00000384352 108 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 RNU1-106P-201ENST00000384382 164 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 RNU6-713P-201ENST00000384761 107 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 RPL24P7-201ENST00000399435 453 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 RNU2-38P-201ENST00000410856 79 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 COX6CP15-201ENST00000426313 211 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 RPL7P4-203ENST00000430239 730 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 RPL7L1P11-201ENST00000446092 721 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 MORF4-201ENST00000447135 971 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AC005008.1-201ENST00000456151 612 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AC090142.1-201ENST00000465776 462 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 RN7SL583P-201ENST00000475692 287 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 RPS18P6-201ENST00000476880 458 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AL049874.2-201ENST00000492636 288 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 RNU6-410P-201ENST00000517006 107 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AC008562.1-201ENST00000521763 330 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AP005435.4-201ENST00000529514 284 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AC103843.2-201ENST00000530523 682 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms