Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 ABI1P1-201ENST00000603375 1120 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AL592436.1-201ENST00000605135 558 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AC055764.2-201ENST00000610089 670 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AC243654.2-201ENST00000612843 443 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AC099669.2-201ENST00000616549 437 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AC079684.1-201ENST00000621405 437 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AL356863.1-201ENST00000623378 1080 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AL122126.1-201ENST00000546905 1318 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AC073073.2-201ENST00000609827 2578 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AL139811.1-201ENST00000424779 2299 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 FAM91A3P-201ENST00000456826 2544 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 RNU1-85P-201ENST00000364127 164 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 MIR554-201ENST00000384874 96 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 MIR199A2-201ENST00000385289 110 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 AL391417.1-201ENST00000404100 426 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 AL138878.1-201ENST00000405131 347 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 CYCSP19-201ENST00000411715 316 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 TCEA1P4-201ENST00000415066 844 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 AL365396.1-201ENST00000430854 671 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 Z74696.2-201ENST00000436514 498 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 SNORA71B-202ENST00000439232 272 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 AC009263.1-201ENST00000441193 1239 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 AC044797.1-201ENST00000445744 679 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 Z95327.1-201ENST00000446082 482 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 SNRPGP5-201ENST00000456003 220 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 RN7SKP209-201ENST00000516888 304 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 NDUFA5P2-201ENST00000519723 344 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 AC009268.1-201ENST00000561352 1203 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 HSPE1P5-201ENST00000561489 272 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 MIR5685-201ENST00000579080 79 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 AC083899.3-201ENST00000603413 594 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 AC090525.3-201ENST00000605601 189 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 AC006946.3-201ENST00000609791 756 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 AC123768.4-201ENST00000616244 701 ntBASIC3.88□□□□□ -1.79
C9orf72Q96LT7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
C9orf72Q96LT7 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 RHEBP3-201ENST00000411920 351 ntBASIC3.87□□□□□ -1.79
C9orf72Q96LT7 MOB1AP1-201ENST00000430903 535 ntBASIC3.87□□□□□ -1.79
C9orf72Q96LT7 Z99127.2-201ENST00000441426 334 ntBASIC3.87□□□□□ -1.79
C9orf72Q96LT7 RRM2P4-201ENST00000441721 562 ntBASIC3.87□□□□□ -1.79
C9orf72Q96LT7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 RN7SL542P-201ENST00000467147 294 ntBASIC3.87□□□□□ -1.79
C9orf72Q96LT7 RPS4XP15-201ENST00000489210 795 ntBASIC3.87□□□□□ -1.79
C9orf72Q96LT7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 RNU1-45P-201ENST00000517191 141 ntBASIC3.87□□□□□ -1.79
C9orf72Q96LT7 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 AC074050.1-201ENST00000563247 211 ntBASIC3.87□□□□□ -1.79
C9orf72Q96LT7 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 AC245389.1-201ENST00000605141 529 ntBASIC3.87□□□□□ -1.79
C9orf72Q96LT7 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 MTCO1P14-201ENST00000441695 1559 ntBASIC3.87□□□□□ -1.79
C9orf72Q96LT7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf72Q96LT7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms