Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC7.19□□□□□ -1.26
LRCH3Q96II8 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.19□□□□□ -1.26
LRCH3Q96II8 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.19□□□□□ -1.26
LRCH3Q96II8 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LRCH3Q96II8 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.19□□□□□ -1.26
LRCH3Q96II8 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LRCH3Q96II8 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.19□□□□□ -1.26
LRCH3Q96II8 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
LRCH3Q96II8 SPATA31C1-201ENST00000420021 3895 ntBASIC7.19□□□□□ -1.26
LRCH3Q96II8 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.19□□□□□ -1.26
LRCH3Q96II8 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LRCH3Q96II8 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.19□□□□□ -1.26
LRCH3Q96II8 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
LRCH3Q96II8 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
LRCH3Q96II8 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.18□□□□□ -1.26
LRCH3Q96II8 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.18□□□□□ -1.26
LRCH3Q96II8 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
LRCH3Q96II8 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
LRCH3Q96II8 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LRCH3Q96II8 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC7.18□□□□□ -1.26
LRCH3Q96II8 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
LRCH3Q96II8 AC027575.3-201ENST00000583058 2747 ntBASIC7.18□□□□□ -1.26
LRCH3Q96II8 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LRCH3Q96II8 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LRCH3Q96II8 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
LRCH3Q96II8 OR52B3P-201ENST00000314715 928 ntBASIC7.18□□□□□ -1.26
LRCH3Q96II8 RNU4-7P-201ENST00000364758 141 ntBASIC7.18□□□□□ -1.26
LRCH3Q96II8 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LRCH3Q96II8 RNU6-641P-201ENST00000384006 107 ntBASIC7.18□□□□□ -1.26
LRCH3Q96II8 UBE2FP1-201ENST00000416536 447 ntBASIC7.18□□□□□ -1.26
LRCH3Q96II8 AC099799.1-201ENST00000439809 192 ntBASIC7.18□□□□□ -1.26
LRCH3Q96II8 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.18□□□□□ -1.26
LRCH3Q96II8 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC7.18□□□□□ -1.26
LRCH3Q96II8 RPL21P93-201ENST00000480465 489 ntBASIC7.18□□□□□ -1.26
LRCH3Q96II8 RPL7AP23-201ENST00000482625 776 ntBASIC7.18□□□□□ -1.26
LRCH3Q96II8 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC7.18□□□□□ -1.26
LRCH3Q96II8 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC7.18□□□□□ -1.26
LRCH3Q96II8 AC114781.3-201ENST00000512083 142 ntBASIC7.18□□□□□ -1.26
LRCH3Q96II8 RNU5B-3P-201ENST00000516601 115 ntBASIC7.18□□□□□ -1.26
LRCH3Q96II8 IL7-206ENST00000520269 456 ntTSL 3 BASIC7.18□□□□□ -1.26
LRCH3Q96II8 AC078899.1-201ENST00000521432 1185 ntBASIC7.18□□□□□ -1.26
LRCH3Q96II8 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC7.18□□□□□ -1.26
LRCH3Q96II8 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC7.18□□□□□ -1.26
LRCH3Q96II8 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC7.18□□□□□ -1.26
LRCH3Q96II8 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LRCH3Q96II8 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC7.18□□□□□ -1.26
LRCH3Q96II8 SNORD39.3-201ENST00000584451 71 ntBASIC7.18□□□□□ -1.26
LRCH3Q96II8 AL031666.3-201ENST00000609320 1006 ntBASIC7.18□□□□□ -1.26
LRCH3Q96II8 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
LRCH3Q96II8 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LRCH3Q96II8 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.18□□□□□ -1.26
LRCH3Q96II8 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
LRCH3Q96II8 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
LRCH3Q96II8 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
LRCH3Q96II8 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LRCH3Q96II8 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LRCH3Q96II8 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
LRCH3Q96II8 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LRCH3Q96II8 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LRCH3Q96II8 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LRCH3Q96II8 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LRCH3Q96II8 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LRCH3Q96II8 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
LRCH3Q96II8 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 DLD-204ENST00000437604 1859 ntTSL 2 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LRCH3Q96II8 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
LRCH3Q96II8 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LRCH3Q96II8 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LRCH3Q96II8 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LRCH3Q96II8 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 AC112255.1-201ENST00000624070 2493 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 AC129502.1-201ENST00000623261 1654 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LRCH3Q96II8 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LRCH3Q96II8 RNY3P13-201ENST00000365542 102 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LRCH3Q96II8 AL034374.1-201ENST00000406329 351 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 AL359265.2-201ENST00000434367 631 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 TIMM9P1-201ENST00000436122 256 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 AL035090.1-201ENST00000454835 332 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 ACA64.1-201ENST00000459171 127 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 RN7SL826P-201ENST00000479724 288 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 AL161747.1-201ENST00000480068 358 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 RNU6-570P-201ENST00000517051 105 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 AC079600.1-201ENST00000550326 297 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms