Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 OR6C5P-201ENST00000452388 923 ntBASIC5.61□□□□□ -1.51
ERCC4Q92889 ZNF114P1-201ENST00000453500 292 ntBASIC5.61□□□□□ -1.51
ERCC4Q92889 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.61□□□□□ -1.51
ERCC4Q92889 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.61□□□□□ -1.51
ERCC4Q92889 RPL7P38-201ENST00000488396 739 ntBASIC5.61□□□□□ -1.51
ERCC4Q92889 RN7SL441P-201ENST00000492388 296 ntBASIC5.61□□□□□ -1.51
ERCC4Q92889 AC073073.1-201ENST00000493920 463 ntBASIC5.61□□□□□ -1.51
ERCC4Q92889 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.61□□□□□ -1.51
ERCC4Q92889 AC113430.1-201ENST00000506872 718 ntBASIC5.61□□□□□ -1.51
ERCC4Q92889 AC110775.1-201ENST00000513721 462 ntBASIC5.61□□□□□ -1.51
ERCC4Q92889 TCP11X3P-202ENST00000514289 1254 ntBASIC5.61□□□□□ -1.51
ERCC4Q92889 OR5AK1P-201ENST00000524837 922 ntBASIC5.61□□□□□ -1.51
ERCC4Q92889 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.61□□□□□ -1.51
ERCC4Q92889 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.61□□□□□ -1.51
ERCC4Q92889 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ERCC4Q92889 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.61□□□□□ -1.51
ERCC4Q92889 AC004217.3-201ENST00000551552 878 ntBASIC5.61□□□□□ -1.51
ERCC4Q92889 SULT1C2P2-201ENST00000562517 294 ntBASIC5.61□□□□□ -1.51
ERCC4Q92889 CYCSP40-201ENST00000575927 294 ntBASIC5.61□□□□□ -1.51
ERCC4Q92889 AC009643.2-201ENST00000603543 1448 ntBASIC5.61□□□□□ -1.51
ERCC4Q92889 AC091946.2-201ENST00000606105 291 ntBASIC5.61□□□□□ -1.51
ERCC4Q92889 AC023813.4-201ENST00000607580 580 ntBASIC5.61□□□□□ -1.51
ERCC4Q92889 AC024560.3-201ENST00000608482 349 ntBASIC5.61□□□□□ -1.51
ERCC4Q92889 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.61□□□□□ -1.51
ERCC4Q92889 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.61□□□□□ -1.51
ERCC4Q92889 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.61□□□□□ -1.51
ERCC4Q92889 MKKS-204ENST00000639674 192 ntBASIC5.61□□□□□ -1.51
ERCC4Q92889 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ERCC4Q92889 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
ERCC4Q92889 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ERCC4Q92889 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.61□□□□□ -1.51
ERCC4Q92889 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.61□□□□□ -1.51
ERCC4Q92889 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.6□□□□□ -1.51
ERCC4Q92889 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ERCC4Q92889 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.6□□□□□ -1.51
ERCC4Q92889 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ERCC4Q92889 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.6□□□□□ -1.51
ERCC4Q92889 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ERCC4Q92889 Y_RNA.6-201ENST00000362350 114 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ERCC4Q92889 ATP5F1P4-201ENST00000397288 746 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.6□□□□□ -1.51
ERCC4Q92889 AL590290.1-201ENST00000405336 380 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.6□□□□□ -1.51
ERCC4Q92889 MIR1286-201ENST00000408112 78 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 RN7SKP126-201ENST00000411143 300 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.6□□□□□ -1.51
ERCC4Q92889 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.6□□□□□ -1.51
ERCC4Q92889 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ERCC4Q92889 BX510359.3-201ENST00000422168 306 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 RPL7P4-203ENST00000430239 730 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 RHOT1P3-201ENST00000436571 331 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 PPIAP17-201ENST00000438507 471 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 AL357520.1-201ENST00000441557 453 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 YWHAQP9-201ENST00000445891 512 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 AL592447.1-201ENST00000447592 540 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 RPL36AP33-201ENST00000450395 310 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.6□□□□□ -1.51
ERCC4Q92889 GYG1P1-201ENST00000460864 698 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.6□□□□□ -1.51
ERCC4Q92889 COPS8P2-201ENST00000473228 627 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.6□□□□□ -1.51
ERCC4Q92889 RPL7P39-201ENST00000481157 744 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 IGBP1P5-201ENST00000507524 1000 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 ENPP7P9-201ENST00000514456 627 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.6□□□□□ -1.51
ERCC4Q92889 RNA5SP249-201ENST00000516127 99 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 AF186190.1-201ENST00000517470 480 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.6□□□□□ -1.51
ERCC4Q92889 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.6□□□□□ -1.51
ERCC4Q92889 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.6□□□□□ -1.51
ERCC4Q92889 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.6□□□□□ -1.51
ERCC4Q92889 NPM1P47-201ENST00000560843 856 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.6□□□□□ -1.51
ERCC4Q92889 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.6□□□□□ -1.51
ERCC4Q92889 Z99129.1-201ENST00000612510 255 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 AC092192.1-201ENST00000633154 1018 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
ERCC4Q92889 AL596275.2-204ENST00000641628 552 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 AL596275.2-206ENST00000641957 626 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
ERCC4Q92889 AL592182.3-201ENST00000642132 3304 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ERCC4Q92889 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ERCC4Q92889 AC005332.5-201ENST00000591222 2919 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 DBF4P1-201ENST00000412976 1892 ntBASIC5.6□□□□□ -1.51
ERCC4Q92889 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ERCC4Q92889 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ERCC4Q92889 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ERCC4Q92889 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ERCC4Q92889 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ERCC4Q92889 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
ERCC4Q92889 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ERCC4Q92889 DDX18P3-201ENST00000404856 2007 ntBASIC5.59□□□□□ -1.51
ERCC4Q92889 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ERCC4Q92889 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ERCC4Q92889 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.59□□□□□ -1.51
ERCC4Q92889 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ERCC4Q92889 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms