Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SETP14-201ENST00000497538 873 ntBASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 IGLVIV-53-201ENST00000520107 367 ntBASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 AC007458.1-201ENST00000542812 373 ntBASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 RNU4-44P-201ENST00000363050 141 ntBASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 NDUFB1P1-201ENST00000435191 180 ntBASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AC092641.1-201ENST00000440229 772 ntBASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AL357552.1-201ENST00000445254 415 ntBASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AC105918.1-201ENST00000474399 838 ntBASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 Vault.1-201ENST00000516474 102 ntBASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 RNU6-579P-201ENST00000516879 102 ntBASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AC009303.3-201ENST00000591103 736 ntBASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AC125494.3-201ENST00000602759 455 ntBASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AL049781.1-201ENST00000623195 3585 ntBASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AL031985.3-201ENST00000565390 2449 ntBASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AC007685.1-201ENST00000329806 452 ntBASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 ATP5A1P2-201ENST00000412323 255 ntBASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 MTND4P22-201ENST00000413116 1169 ntBASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AC099563.1-201ENST00000456086 418 ntBASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AC006504.3-201ENST00000586818 523 ntBASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHROOM3Q8TF72 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 SNORA48.5-201ENST00000391143 135 ntBASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 RNA5SP120-201ENST00000410900 112 ntBASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 NPM1P39-201ENST00000449818 867 ntBASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 OR52Y1P-201ENST00000452418 828 ntBASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 RN7SL601P-201ENST00000471221 293 ntBASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 AC005798.1-201ENST00000513715 387 ntBASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 AL163642.2-201ENST00000604722 1019 ntBASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 AL033523.1-201ENST00000605153 153 ntBASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 MIR6715A-201ENST00000615929 79 ntBASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 AC069209.1-201ENST00000619282 651 ntBASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 OTUD4P1-201ENST00000237841 3067 ntBASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 RAC1P3-201ENST00000416129 580 ntBASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 APOOP2-201ENST00000461561 539 ntBASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 RANP9-201ENST00000519957 271 ntBASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 AC006077.1-201ENST00000604746 343 ntBASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 AC005972.3-201ENST00000606304 481 ntBASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 AC119674.1-212ENST00000641155 993 ntBASIC3.62□□□□□ -1.83
SHROOM3Q8TF72 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 ANKRD36P1-201ENST00000344424 659 ntBASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 RN7SKP56-201ENST00000410513 331 ntBASIC3.61□□□□□ -1.83
SHROOM3Q8TF72 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms