Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AC005294.1-201ENST00000355509 281 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 Y_RNA.159-201ENST00000363674 87 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AL953862.1-201ENST00000423016 168 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AL513175.1-201ENST00000431492 780 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AL450996.1-201ENST00000445574 1202 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 ARL2BPP10-201ENST00000446487 531 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AC004129.2-201ENST00000457229 287 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AC073610.1-201ENST00000489971 396 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 RN7SL547P-201ENST00000490793 290 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 CDH12P2-201ENST00000504393 298 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 RNU6-835P-201ENST00000516974 104 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 OR5B19P-201ENST00000531766 928 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AL121594.2-201ENST00000541658 472 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AC004817.2-201ENST00000561794 651 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AC138915.2-201ENST00000569776 97 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AC090948.1-201ENST00000607464 549 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AC019193.3-201ENST00000609144 554 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AC009248.2-201ENST00000619826 254 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 AC025470.1-201ENST00000510053 2032 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 CASC19-260ENST00000641828 2001 ntBASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 CASC19-221ENST00000641309 1382 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 Y_RNA.184-201ENST00000363884 108 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 RNA5SP234-201ENST00000363916 119 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 AL162578.1-201ENST00000406202 378 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 AL356967.1-201ENST00000406305 431 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 SNORA11C-201ENST00000408532 129 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 AC083875.1-201ENST00000419509 405 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 AL133173.1-201ENST00000423458 397 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 HSPE1P16-201ENST00000426640 348 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 NPM1P34-201ENST00000428821 893 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 AC133104.1-201ENST00000429100 218 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 RPL31P35-201ENST00000431058 377 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 RPS3AP38-201ENST00000435889 763 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 AL672138.1-201ENST00000450604 1015 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 MTND1P3-201ENST00000484956 952 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 PPP1R11P1-201ENST00000486095 376 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 AC112206.3-201ENST00000514578 389 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 MTND5P4-201ENST00000514978 288 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 COX6CP5-201ENST00000527162 228 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 SLC2A13P1-201ENST00000531560 322 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 NPM1P42-201ENST00000560329 862 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 AC034105.3-201ENST00000565294 442 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 AC015720.2-201ENST00000567709 334 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 MIR4307-201ENST00000582802 84 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 MIR3149-201ENST00000584629 83 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 AL669831.4-202ENST00000590817 238 ntBASIC5.98□□□□□ -1.45
SHKBP1Q8TBC3 FKBP1AP1-201ENST00000594588 318 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms