Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
DEPDC4Q8N2C3 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.4
DEPDC4Q8N2C3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.4
DEPDC4Q8N2C3 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.4
DEPDC4Q8N2C3 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.27□□□□□ -1.4
DEPDC4Q8N2C3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AC008758.3-201ENST00000507003 1829 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 Y_RNA.28-201ENST00000362554 111 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 Y_RNA.112-201ENST00000363250 102 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 RNU4-81P-201ENST00000363561 144 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 Y_RNA.378-201ENST00000365652 113 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 RNU1-74P-201ENST00000384108 171 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 RNU6-1105P-201ENST00000384774 107 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AP003170.5-201ENST00000397185 335 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 RNU6-370P-201ENST00000411008 104 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AL139396.1-201ENST00000421137 167 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 PMCHL1-202ENST00000423102 261 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 RPL7AP14-201ENST00000424041 802 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AC009237.4-201ENST00000441078 238 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AL137792.2-201ENST00000443484 235 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AL031584.1-201ENST00000447169 754 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AC239809.1-201ENST00000450470 217 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 SRP68P2-201ENST00000456184 254 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AL133480.2-201ENST00000456723 487 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AC079168.1-201ENST00000458741 345 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 RN7SL382P-201ENST00000482631 282 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 CHCHD2P7-201ENST00000508008 452 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AC016065.2-201ENST00000514530 444 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 MRPS5P3-201ENST00000515577 166 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 RNU6-566P-201ENST00000516790 107 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 RNU6-988P-201ENST00000519081 107 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AC008055.1-201ENST00000547032 609 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AC063950.1-201ENST00000552036 308 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AC096861.1-201ENST00000616652 240 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
DEPDC4Q8N2C3 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 PHKBP1-201ENST00000450951 1951 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC244517.1-201ENST00000606030 2086 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms