Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC239868.4-201ENST00000608318 671 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.56□□□□□ -1.52
SYNE4Q8N205 AC073114.1-201ENST00000612027 490 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 AC015540.1-201ENST00000615828 501 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SYNE4Q8N205 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
SYNE4Q8N205 AL603750.1-201ENST00000624216 1717 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SYNE4Q8N205 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.56□□□□□ -1.52
SYNE4Q8N205 SPATA2P1-201ENST00000431223 2055 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNE4Q8N205 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE4Q8N205 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SYNE4Q8N205 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNE4Q8N205 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE4Q8N205 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SYNE4Q8N205 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SYNE4Q8N205 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE4Q8N205 RNA5SP283-201ENST00000365604 119 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE4Q8N205 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SYNE4Q8N205 RPS27AP11-201ENST00000402798 447 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 PPIAP31-201ENST00000405422 495 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 RN7SKP202-201ENST00000410439 330 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 RPS7P9-201ENST00000414704 586 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 AC023128.2-201ENST00000420880 1223 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 RPL7P53-201ENST00000421245 739 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 MTND4P20-201ENST00000424125 869 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 RAC1P8-201ENST00000427086 527 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 C8orf59P1-201ENST00000429930 303 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 MTND1P32-201ENST00000433043 938 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 AC098826.1-201ENST00000433943 471 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 MTND1P4-201ENST00000435196 415 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNE4Q8N205 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.55□□□□□ -1.52
SYNE4Q8N205 AL929288.2-201ENST00000446368 407 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNE4Q8N205 AC104651.2-201ENST00000447549 528 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNE4Q8N205 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE4Q8N205 CALM1P2-201ENST00000452941 448 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE4Q8N205 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE4Q8N205 SNRPCP3-201ENST00000474888 476 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNE4Q8N205 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNE4Q8N205 IGKV2-23-201ENST00000518729 323 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 AC092851.1-201ENST00000535964 478 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE4Q8N205 RN7SL600P-201ENST00000581811 299 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 AP003465.2-201ENST00000602571 373 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 AC073648.5-201ENST00000603502 305 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 AL354984.3-201ENST00000604803 325 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 RBM11P1-201ENST00000604951 799 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 AC007494.3-201ENST00000624660 743 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE4Q8N205 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE4Q8N205 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE4Q8N205 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE4Q8N205 AC027514.1-201ENST00000588561 1603 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 AL672167.1-204ENST00000641875 3017 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE4Q8N205 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SYNE4Q8N205 ZNF849P-201ENST00000594711 1566 ntBASIC5.55□□□□□ -1.52
SYNE4Q8N205 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.54□□□□□ -1.52
SYNE4Q8N205 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE4Q8N205 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SYNE4Q8N205 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.54□□□□□ -1.52
SYNE4Q8N205 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.54□□□□□ -1.52
SYNE4Q8N205 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SYNE4Q8N205 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SYNE4Q8N205 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE4Q8N205 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SYNE4Q8N205 MIR383-201ENST00000362257 73 ntBASIC5.54□□□□□ -1.52
SYNE4Q8N205 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
SYNE4Q8N205 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE4Q8N205 ERHP2-201ENST00000402323 299 ntBASIC5.54□□□□□ -1.52
SYNE4Q8N205 AL592291.1-201ENST00000403830 352 ntBASIC5.54□□□□□ -1.52
SYNE4Q8N205 EIF4A1P1-201ENST00000420241 934 ntBASIC5.54□□□□□ -1.52
SYNE4Q8N205 REREP1Y-201ENST00000422655 198 ntBASIC5.54□□□□□ -1.52
SYNE4Q8N205 AC129850.1-201ENST00000436203 508 ntBASIC5.54□□□□□ -1.52
SYNE4Q8N205 REREP2Y-201ENST00000439103 200 ntBASIC5.54□□□□□ -1.52
SYNE4Q8N205 AL031667.1-201ENST00000440222 725 ntBASIC5.54□□□□□ -1.52
SYNE4Q8N205 AC114495.1-201ENST00000441274 436 ntBASIC5.54□□□□□ -1.52
SYNE4Q8N205 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.54□□□□□ -1.52
SYNE4Q8N205 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNE4Q8N205 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.54□□□□□ -1.52
SYNE4Q8N205 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.54□□□□□ -1.52
SYNE4Q8N205 SRRM1P2-201ENST00000464531 1192 ntBASIC5.54□□□□□ -1.52
SYNE4Q8N205 SYPL1P1-201ENST00000473622 768 ntBASIC5.54□□□□□ -1.52
SYNE4Q8N205 RN7SL132P-201ENST00000478131 296 ntBASIC5.54□□□□□ -1.52
SYNE4Q8N205 RPL23AP44-201ENST00000482216 473 ntBASIC5.54□□□□□ -1.52
SYNE4Q8N205 AC020890.1-201ENST00000491837 504 ntBASIC5.54□□□□□ -1.52
SYNE4Q8N205 RNA5SP303-201ENST00000516192 130 ntBASIC5.54□□□□□ -1.52
SYNE4Q8N205 RNU1-45P-201ENST00000517191 141 ntBASIC5.54□□□□□ -1.52
SYNE4Q8N205 HIGD1AP18-201ENST00000520730 278 ntBASIC5.54□□□□□ -1.52
SYNE4Q8N205 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.54□□□□□ -1.52
SYNE4Q8N205 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms