Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SCXQ7RTU7 AL157700.1-201ENST00000561973 1432 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SCXQ7RTU7 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
SCXQ7RTU7 RNA5SP307-201ENST00000362863 116 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 RNA5SP283-201ENST00000365604 119 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 AL359837.1-201ENST00000381357 287 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 SNORA48.7-201ENST00000391302 135 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 DNAJC19P6-201ENST00000401853 280 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 RPL21P65-201ENST00000406094 466 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 RN7SKP182-201ENST00000410772 298 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 RN7SKP33-201ENST00000410942 340 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 SNORA74C-2-201ENST00000411179 201 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 AL356095.1-201ENST00000417217 199 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SCXQ7RTU7 RPL7P2-201ENST00000427639 268 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 OR4F13P-201ENST00000428478 931 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 CDY14P-201ENST00000431260 1014 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 RPL23AP46-201ENST00000438548 490 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 CDY12P-201ENST00000440679 1015 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 CDY13P-201ENST00000445813 1015 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 CDY23P-201ENST00000451661 1014 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 CFTRP1-201ENST00000456646 183 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC078785.3-201ENST00000476607 425 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC090543.1-201ENST00000492168 485 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 TMEM248P1-201ENST00000510579 951 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC093755.1-201ENST00000512950 1023 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 MED28P5-201ENST00000528254 438 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC107016.1-201ENST00000550463 337 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 RN7SL600P-201ENST00000581811 299 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC006116.5-201ENST00000591936 559 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 AP002360.3-201ENST00000607673 710 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 MIR6867-201ENST00000610636 67 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC016911.1-201ENST00000613297 452 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC007546.1-201ENST00000619452 559 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC022079.2-201ENST00000619739 566 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC024023.1-201ENST00000624530 922 ntBASIC2.7□□□□□ -1.98
SCXQ7RTU7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SCXQ7RTU7 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.7□□□□□ -1.98
SCXQ7RTU7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SCXQ7RTU7 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SCXQ7RTU7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.69□□□□□ -1.98
SCXQ7RTU7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
SCXQ7RTU7 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC2.69□□□□□ -1.98
SCXQ7RTU7 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SCXQ7RTU7 RN7SKP280-201ENST00000364196 304 ntBASIC2.69□□□□□ -1.98
SCXQ7RTU7 RNA5SP130-201ENST00000364431 114 ntBASIC2.69□□□□□ -1.98
SCXQ7RTU7 RNA5SP189-201ENST00000364920 115 ntBASIC2.69□□□□□ -1.98
SCXQ7RTU7 SNORA27.3-201ENST00000364937 134 ntBASIC2.69□□□□□ -1.98
SCXQ7RTU7 MIR23B-201ENST00000384832 97 ntBASIC2.69□□□□□ -1.98
SCXQ7RTU7 AL138878.1-201ENST00000405131 347 ntBASIC2.69□□□□□ -1.98
SCXQ7RTU7 MTATP6P31-201ENST00000406985 692 ntBASIC2.69□□□□□ -1.98
SCXQ7RTU7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.69□□□□□ -1.98
SCXQ7RTU7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.69□□□□□ -1.98
SCXQ7RTU7 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SCXQ7RTU7 NUP35P2-201ENST00000416748 943 ntBASIC2.69□□□□□ -1.98
SCXQ7RTU7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC2.69□□□□□ -1.98
SCXQ7RTU7 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.69□□□□□ -1.98
SCXQ7RTU7 RPS15AP40-201ENST00000419621 391 ntBASIC2.69□□□□□ -1.98
SCXQ7RTU7 AL159169.1-201ENST00000421119 127 ntBASIC2.69□□□□□ -1.98
SCXQ7RTU7 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SCXQ7RTU7 USP9YP31-201ENST00000431405 881 ntBASIC2.69□□□□□ -1.98
SCXQ7RTU7 RPEP2-201ENST00000432149 701 ntBASIC2.69□□□□□ -1.98
SCXQ7RTU7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.69□□□□□ -1.98
SCXQ7RTU7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.69□□□□□ -1.98
SCXQ7RTU7 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms