Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
FNDC3BQ53EP0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
FNDC3BQ53EP0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC079097.1-201ENST00000512187 1399 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC010266.2-201ENST00000564741 3255 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 Y_RNA.516-201ENST00000384541 124 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 RN7SKP126-201ENST00000411143 300 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AIMP1P1-201ENST00000418670 937 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC010975.2-201ENST00000427781 588 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 HSPE1P28-201ENST00000443139 211 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 LINC02210-201ENST00000444561 288 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 GDI2P2-201ENST00000445131 608 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 BX322784.1-201ENST00000455793 1077 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 snoU109.1-201ENST00000459339 135 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 SNORD42A-201ENST00000459584 64 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 PLGLA-201ENST00000465668 449 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 RN7SL826P-201ENST00000479724 288 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 RPL9P33-201ENST00000484311 566 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 RPL7P24-201ENST00000493052 752 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 SNRPCP2-201ENST00000504370 475 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 OR5AP1P-201ENST00000529730 940 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC137800.2-201ENST00000574375 120 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 MIR5697-201ENST00000578045 78 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC090312.1-201ENST00000580637 348 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 MIR4307-201ENST00000582802 84 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC087763.1-201ENST00000603391 286 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC008250.2-201ENST00000615261 205 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC108479.2-201ENST00000617314 601 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC090510.2-201ENST00000617465 629 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC006378.2-201ENST00000623178 2476 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC093849.1-201ENST00000563631 2209 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AL451142.2-201ENST00000429076 2090 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 AC130650.2-201ENST00000618736 2403 ntBASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.44□□□□□ -1.54
FNDC3BQ53EP0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 AC092681.1-201ENST00000297369 291 ntBASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 OR11H4-201ENST00000315409 1082 ntBASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 Y_RNA.41-201ENST00000362646 102 ntBASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 RNU6-533P-201ENST00000384144 107 ntBASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 RNU1-106P-201ENST00000384382 164 ntBASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 COX6CP17-201ENST00000421389 185 ntBASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 NMNAT1P2-201ENST00000435192 860 ntBASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 MTND1P4-201ENST00000435196 415 ntBASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 MTATP6P13-201ENST00000438531 667 ntBASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 MTCO2P3-201ENST00000442543 421 ntBASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 AL590365.1-201ENST00000450788 243 ntBASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.43□□□□□ -1.54
FNDC3BQ53EP0 AC104073.1-201ENST00000451988 151 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms