Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 HMGB1P3-201ENST00000502802 616 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 AC010285.3-201ENST00000511668 676 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 RNA5SP208-201ENST00000516156 78 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 IGKV2-38-201ENST00000517443 247 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 PAICSP4-201ENST00000517543 1253 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 HMGB1P46-201ENST00000520062 610 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 HIGD1AP18-201ENST00000520730 278 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 AL731537.2-201ENST00000561565 951 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 AC104662.1-201ENST00000604448 511 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 AL049634.3-201ENST00000604968 457 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 AC010680.4-201ENST00000605334 543 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 MIR7973-1-201ENST00000614683 76 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 AC012314.7-201ENST00000619693 93 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 MIR7154-201ENST00000620673 73 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 RPL7AP73-201ENST00000413490 353 ntBASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 AL606490.7-201ENST00000433136 191 ntBASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 VN1R25P-201ENST00000443385 738 ntBASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 AL500527.1-201ENST00000448532 255 ntBASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 AL121877.1-201ENST00000453704 622 ntBASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 VN1R40P-201ENST00000455196 941 ntBASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 AC025181.1-201ENST00000477507 416 ntBASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 AC011037.1-201ENST00000483964 558 ntBASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 CYP4A43P-201ENST00000568156 121 ntBASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM1Q2M3G4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 RNU6-244P-201ENST00000391028 104 ntBASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 LAP3P1-201ENST00000403648 294 ntBASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 SYT14P1-201ENST00000481459 721 ntBASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 RAC1P2-201ENST00000511164 579 ntBASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 OR4A2P-201ENST00000527276 913 ntBASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 AP000619.3-201ENST00000535634 1127 ntBASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 AC007424.1-203ENST00000554613 687 ntBASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 AL161756.2-201ENST00000604597 246 ntBASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 RNU1-30P-201ENST00000606575 163 ntBASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 AL391497.1-201ENST00000608671 547 ntBASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 AC135803.1-201ENST00000608748 565 ntBASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 AC015813.4-201ENST00000610469 179 ntBASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.5□□□□□ -1.69
SHROOM1Q2M3G4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 AC007685.1-201ENST00000329806 452 ntBASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.49□□□□□ -1.69
SHROOM1Q2M3G4 RNU6-31P-201ENST00000384388 108 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms