Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC044797.1-201ENST00000445744 679 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 NPM1P39-201ENST00000449818 867 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 AC098824.1-201ENST00000453565 980 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.99□□□□□ -1.77
SIX1Q15475 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.99□□□□□ -1.77
SIX1Q15475 SUMO2P20-201ENST00000520803 283 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 NPM1P6-201ENST00000521088 871 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.99□□□□□ -1.77
SIX1Q15475 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.99□□□□□ -1.77
SIX1Q15475 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SIX1Q15475 AL121576.1-201ENST00000556055 276 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.99□□□□□ -1.77
SIX1Q15475 AC099489.2-201ENST00000574976 260 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.99□□□□□ -1.77
SIX1Q15475 AC020910.2-201ENST00000603635 610 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 AL158050.2-201ENST00000605336 568 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.99□□□□□ -1.77
SIX1Q15475 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.99□□□□□ -1.77
SIX1Q15475 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SIX1Q15475 AC004808.1-201ENST00000627671 721 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 AC083865.1-201ENST00000636634 831 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SIX1Q15475 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
SIX1Q15475 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.98□□□□□ -1.77
SIX1Q15475 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SIX1Q15475 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SIX1Q15475 AC012020.1-201ENST00000624541 1728 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SIX1Q15475 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SIX1Q15475 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SIX1Q15475 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.98□□□□□ -1.77
SIX1Q15475 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.98□□□□□ -1.77
SIX1Q15475 HMGB1P13-201ENST00000406019 642 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 ATF1P1-201ENST00000406040 927 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 AL355615.1-201ENST00000406187 641 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 RN7SKP222-201ENST00000410651 315 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 AC108032.1-201ENST00000416706 207 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 AL356095.1-201ENST00000417217 199 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 MTCO3P4-201ENST00000419236 787 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 AC023128.2-201ENST00000420880 1223 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 AC022022.1-201ENST00000430304 178 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX1Q15475 AP000936.3-201ENST00000438127 255 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 MTND6P18-201ENST00000439477 513 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX1Q15475 RPL34P26-201ENST00000445636 354 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SIX1Q15475 AL133244.1-201ENST00000456007 258 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 AL672167.3-201ENST00000465951 960 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 AC010307.1-201ENST00000467206 836 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 RPL21P18-201ENST00000469899 480 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.98□□□□□ -1.77
SIX1Q15475 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SIX1Q15475 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX1Q15475 AF186190.1-201ENST00000517470 480 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 IGLVIV-53-201ENST00000520107 367 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.98□□□□□ -1.77
SIX1Q15475 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.98□□□□□ -1.77
SIX1Q15475 AC107918.3-201ENST00000533272 382 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.98□□□□□ -1.77
SIX1Q15475 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX1Q15475 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX1Q15475 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX1Q15475 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX1Q15475 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SIX1Q15475 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.98□□□□□ -1.77
SIX1Q15475 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX1Q15475 AC090666.1-201ENST00000578241 445 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 AL020997.2-201ENST00000602607 184 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 AC018618.2-201ENST00000604770 446 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 ARF4P1-201ENST00000605447 541 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX1Q15475 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX1Q15475 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.98□□□□□ -1.77
SIX1Q15475 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX1Q15475 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX1Q15475 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.98□□□□□ -1.77
SIX1Q15475 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.98□□□□□ -1.77
SIX1Q15475 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.98□□□□□ -1.77
SIX1Q15475 AL445984.1-201ENST00000637834 659 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.98□□□□□ -1.77
SIX1Q15475 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.98□□□□□ -1.77
SIX1Q15475 CASC19-284ENST00000642142 1868 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 AP002001.2-201ENST00000529025 1469 ntBASIC3.98□□□□□ -1.77
SIX1Q15475 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
SIX1Q15475 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SIX1Q15475 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.97□□□□□ -1.77
SIX1Q15475 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SIX1Q15475 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SIX1Q15475 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SIX1Q15475 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SIX1Q15475 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SIX1Q15475 RNU6-185P-201ENST00000384421 107 ntBASIC3.97□□□□□ -1.77
SIX1Q15475 AP002784.2-201ENST00000397300 549 ntBASIC3.97□□□□□ -1.77
SIX1Q15475 RNU4-6P-201ENST00000410804 122 ntBASIC3.97□□□□□ -1.77
SIX1Q15475 AC004975.1-201ENST00000428733 208 ntBASIC3.97□□□□□ -1.77
SIX1Q15475 FO393419.3-201ENST00000428741 282 ntBASIC3.97□□□□□ -1.77
SIX1Q15475 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms