Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 IMMP1LP3-201ENST00000604197 224 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC6.03□□□□□ -1.44
SOX4Q06945 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.03□□□□□ -1.44
SOX4Q06945 AC243773.3-201ENST00000613270 256 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.03□□□□□ -1.44
SOX4Q06945 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX4Q06945 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.03□□□□□ -1.44
SOX4Q06945 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SOX4Q06945 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX4Q06945 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX4Q06945 AC092162.3-201ENST00000624511 1624 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 AC093311.1-201ENST00000506586 2021 ntBASIC6.03□□□□□ -1.44
SOX4Q06945 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.03□□□□□ -1.44
SOX4Q06945 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SOX4Q06945 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.44
SOX4Q06945 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.02□□□□□ -1.44
SOX4Q06945 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX4Q06945 AC235565.1-201ENST00000456962 1325 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
SOX4Q06945 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.02□□□□□ -1.45
SOX4Q06945 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.02□□□□□ -1.45
SOX4Q06945 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX4Q06945 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.02□□□□□ -1.45
SOX4Q06945 AC087516.1-201ENST00000561236 2428 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SOX4Q06945 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX4Q06945 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
SOX4Q06945 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.02□□□□□ -1.45
SOX4Q06945 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX4Q06945 RNU6-373P-201ENST00000411247 98 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 AC096921.1-201ENST00000411661 375 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC6.02□□□□□ -1.45
SOX4Q06945 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX4Q06945 RPL35AP12-201ENST00000425362 338 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX4Q06945 GPM6BP2-201ENST00000432046 144 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC6.02□□□□□ -1.45
SOX4Q06945 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.02□□□□□ -1.45
SOX4Q06945 BRK1P2-201ENST00000442875 223 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 SPRYD7P1-201ENST00000443861 570 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.02□□□□□ -1.45
SOX4Q06945 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX4Q06945 GPM6BP1-201ENST00000446387 144 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 RPL7P12-201ENST00000446719 750 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX4Q06945 RPL7P19-201ENST00000469948 618 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 AC128716.1-201ENST00000475129 166 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX4Q06945 RNU7-30P-201ENST00000516835 62 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX4Q06945 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.02□□□□□ -1.45
SOX4Q06945 FKBP1AP1-201ENST00000594588 318 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 RNU6ATAC35P-201ENST00000609276 444 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 AC040896.1-201ENST00000613819 479 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC6.02□□□□□ -1.45
SOX4Q06945 AC024940.5-201ENST00000622889 474 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 TPTEP1-208ENST00000636884 213 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 AC100810.6-201ENST00000638068 285 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.02□□□□□ -1.45
SOX4Q06945 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
SOX4Q06945 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX4Q06945 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
SOX4Q06945 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX4Q06945 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SOX4Q06945 AC068870.1-201ENST00000563737 2455 ntBASIC6.02□□□□□ -1.45
SOX4Q06945 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
SOX4Q06945 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX4Q06945 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SOX4Q06945 RLIMP2-201ENST00000427891 1563 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX4Q06945 LINC01963-201ENST00000562038 3148 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 AC025574.1-201ENST00000554784 1653 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX4Q06945 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX4Q06945 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SOX4Q06945 Y_RNA.144-201ENST00000363521 113 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 Y_RNA.381-201ENST00000365666 102 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 AL121972.1-201ENST00000402023 252 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 RN7SKP279-201ENST00000411383 298 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 RPL26P29-201ENST00000415623 438 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX4Q06945 AL355433.1-201ENST00000422804 300 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX4Q06945 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX4Q06945 AC024082.2-201ENST00000434771 238 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 SNRPEP7-201ENST00000438350 220 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX4Q06945 NDUFA5P7-201ENST00000452914 242 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX4Q06945 MEMO1P4-201ENST00000453590 386 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.01□□□□□ -1.45
SOX4Q06945 AC083798.1-201ENST00000472671 131 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 COPS8P2-201ENST00000473228 627 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC6.01□□□□□ -1.45
SOX4Q06945 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX4Q06945 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.01□□□□□ -1.45
SOX4Q06945 RN7SKP13-201ENST00000515933 244 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 RN7SKP116-201ENST00000516902 319 ntBASIC6.01□□□□□ -1.45
SOX4Q06945 TRMT10BP1-201ENST00000519377 943 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms