Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.01□□□□□ -1.77
TPM4P67936 RNU6-1251P-201ENST00000364502 107 ntBASIC4.01□□□□□ -1.77
TPM4P67936 RNU6-532P-201ENST00000384318 107 ntBASIC4.01□□□□□ -1.77
TPM4P67936 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TPM4P67936 AC136624.1-201ENST00000400791 413 ntBASIC4.01□□□□□ -1.77
TPM4P67936 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.01□□□□□ -1.77
TPM4P67936 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.01□□□□□ -1.77
TPM4P67936 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.01□□□□□ -1.77
TPM4P67936 AC017079.2-201ENST00000416102 485 ntBASIC4.01□□□□□ -1.77
TPM4P67936 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.01□□□□□ -1.77
TPM4P67936 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TPM4P67936 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.01□□□□□ -1.77
TPM4P67936 OR9M1P-201ENST00000459641 921 ntBASIC4.01□□□□□ -1.77
TPM4P67936 SNX5P1-201ENST00000505757 1041 ntBASIC4.01□□□□□ -1.77
TPM4P67936 AC113398.2-201ENST00000507630 558 ntBASIC4.01□□□□□ -1.77
TPM4P67936 AC110768.1-201ENST00000509222 400 ntBASIC4.01□□□□□ -1.77
TPM4P67936 TXNP6-201ENST00000510190 310 ntBASIC4.01□□□□□ -1.77
TPM4P67936 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.01□□□□□ -1.77
TPM4P67936 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.01□□□□□ -1.77
TPM4P67936 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.01□□□□□ -1.77
TPM4P67936 RNU4-18P-201ENST00000516751 149 ntBASIC4.01□□□□□ -1.77
TPM4P67936 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TPM4P67936 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.01□□□□□ -1.77
TPM4P67936 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.01□□□□□ -1.77
TPM4P67936 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
TPM4P67936 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.01□□□□□ -1.77
TPM4P67936 AC011816.2-201ENST00000607089 556 ntBASIC4.01□□□□□ -1.77
TPM4P67936 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TPM4P67936 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TPM4P67936 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TPM4P67936 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.01□□□□□ -1.77
TPM4P67936 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TPM4P67936 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.01□□□□□ -1.77
TPM4P67936 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4□□□□□ -1.77
TPM4P67936 DCAF13P1-201ENST00000495256 1330 ntBASIC4□□□□□ -1.77
TPM4P67936 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TPM4P67936 AL353746.1-201ENST00000566293 6881 ntBASIC4□□□□□ -1.77
TPM4P67936 AC007656.2-201ENST00000624902 4547 ntBASIC4□□□□□ -1.77
TPM4P67936 RNU1-75P-201ENST00000347264 129 ntBASIC4□□□□□ -1.77
TPM4P67936 GLS-203ENST00000409215 632 ntTSL 4 BASIC4□□□□□ -1.77
TPM4P67936 RPA2P2-201ENST00000419698 796 ntBASIC4□□□□□ -1.77
TPM4P67936 FAR2P4-202ENST00000425399 584 ntBASIC4□□□□□ -1.77
TPM4P67936 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4□□□□□ -1.77
TPM4P67936 AL357552.1-201ENST00000445254 415 ntBASIC4□□□□□ -1.77
TPM4P67936 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4□□□□□ -1.77
TPM4P67936 HMGN2P7-201ENST00000456186 273 ntBASIC4□□□□□ -1.77
TPM4P67936 RPS27P29-201ENST00000463110 252 ntBASIC4□□□□□ -1.77
TPM4P67936 RPL9P32-201ENST00000464118 620 ntBASIC4□□□□□ -1.77
TPM4P67936 AP002884.2-201ENST00000471647 395 ntBASIC4□□□□□ -1.77
TPM4P67936 AC084357.1-201ENST00000473404 255 ntBASIC4□□□□□ -1.77
TPM4P67936 RN7SL442P-201ENST00000473804 320 ntBASIC4□□□□□ -1.77
TPM4P67936 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4□□□□□ -1.77
TPM4P67936 AC021146.5-201ENST00000503544 545 ntBASIC4□□□□□ -1.77
TPM4P67936 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4□□□□□ -1.77
TPM4P67936 SNORA70.19-201ENST00000516717 90 ntBASIC4□□□□□ -1.77
TPM4P67936 RN7SKP289-201ENST00000517244 295 ntBASIC4□□□□□ -1.77
TPM4P67936 PTS-202ENST00000524931 696 ntTSL 3 BASIC4□□□□□ -1.77
TPM4P67936 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4□□□□□ -1.77
TPM4P67936 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4□□□□□ -1.77
TPM4P67936 CYCSP30-201ENST00000546447 172 ntBASIC4□□□□□ -1.77
TPM4P67936 DUXAP6-201ENST00000553858 601 ntBASIC4□□□□□ -1.77
TPM4P67936 MIR4284-201ENST00000578924 81 ntBASIC4□□□□□ -1.77
TPM4P67936 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4□□□□□ -1.77
TPM4P67936 AL391834.1-201ENST00000609609 560 ntBASIC4□□□□□ -1.77
TPM4P67936 MIR6867-201ENST00000610636 67 ntBASIC4□□□□□ -1.77
TPM4P67936 AC005344.1-201ENST00000613391 459 ntBASIC4□□□□□ -1.77
TPM4P67936 AL133370.2-201ENST00000619934 439 ntBASIC4□□□□□ -1.77
TPM4P67936 AL355480.1-201ENST00000629041 99 ntBASIC4□□□□□ -1.77
TPM4P67936 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4□□□□□ -1.77
TPM4P67936 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4□□□□□ -1.77
TPM4P67936 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4□□□□□ -1.77
TPM4P67936 AL513302.2-201ENST00000562313 1842 ntBASIC4□□□□□ -1.77
TPM4P67936 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TPM4P67936 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TPM4P67936 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
TPM4P67936 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
TPM4P67936 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TPM4P67936 SNORD6-201ENST00000365444 73 ntBASIC3.99□□□□□ -1.77
TPM4P67936 RNU6-805P-201ENST00000365643 106 ntBASIC3.99□□□□□ -1.77
TPM4P67936 HMGB3P18-201ENST00000406327 590 ntBASIC3.99□□□□□ -1.77
TPM4P67936 MTND4P22-201ENST00000413116 1169 ntBASIC3.99□□□□□ -1.77
TPM4P67936 AL513174.1-201ENST00000423182 629 ntBASIC3.99□□□□□ -1.77
TPM4P67936 USP9YP31-201ENST00000431405 881 ntBASIC3.99□□□□□ -1.77
TPM4P67936 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.99□□□□□ -1.77
TPM4P67936 RPS29P33-201ENST00000456717 146 ntBASIC3.99□□□□□ -1.77
TPM4P67936 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.99□□□□□ -1.77
TPM4P67936 RPL23AP67-201ENST00000465341 474 ntBASIC3.99□□□□□ -1.77
TPM4P67936 AC023598.1-201ENST00000472521 361 ntBASIC3.99□□□□□ -1.77
TPM4P67936 AC006463.2-201ENST00000473326 348 ntBASIC3.99□□□□□ -1.77
TPM4P67936 AP000563.1-201ENST00000490865 758 ntBASIC3.99□□□□□ -1.77
TPM4P67936 RN7SL323P-201ENST00000494712 295 ntBASIC3.99□□□□□ -1.77
TPM4P67936 OR5H4P-201ENST00000510851 923 ntBASIC3.99□□□□□ -1.77
TPM4P67936 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.99□□□□□ -1.77
TPM4P67936 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.99□□□□□ -1.77
TPM4P67936 AC051619.2-201ENST00000559063 397 ntBASIC3.99□□□□□ -1.77
TPM4P67936 MIR3939-201ENST00000582614 106 ntBASIC3.99□□□□□ -1.77
TPM4P67936 AC068790.4-201ENST00000602474 263 ntBASIC3.99□□□□□ -1.77
TPM4P67936 AL606490.9-201ENST00000603331 271 ntBASIC3.99□□□□□ -1.77
TPM4P67936 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.99□□□□□ -1.77
TPM4P67936 AC073342.3-201ENST00000624211 193 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms