Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 IGKV2-23-201ENST00000518729 323 ntBASIC2.27□□□□□ -2.05
RPL39P62891 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.27□□□□□ -2.05
RPL39P62891 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.27□□□□□ -2.05
RPL39P62891 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.27□□□□□ -2.05
RPL39P62891 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.27□□□□□ -2.05
RPL39P62891 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
RPL39P62891 UBE2NP1-201ENST00000545592 458 ntBASIC2.27□□□□□ -2.05
RPL39P62891 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.27□□□□□ -2.05
RPL39P62891 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.27□□□□□ -2.05
RPL39P62891 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.27□□□□□ -2.05
RPL39P62891 MIR4675-201ENST00000577898 77 ntBASIC2.27□□□□□ -2.05
RPL39P62891 AC107982.3-201ENST00000584957 985 ntBASIC2.27□□□□□ -2.05
RPL39P62891 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
RPL39P62891 AC104785.1-201ENST00000603220 588 ntBASIC2.27□□□□□ -2.05
RPL39P62891 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.27□□□□□ -2.05
RPL39P62891 AC090948.2-201ENST00000607363 564 ntBASIC2.27□□□□□ -2.05
RPL39P62891 MIR7851-201ENST00000610611 160 ntBASIC2.27□□□□□ -2.05
RPL39P62891 RNA5SP196-201ENST00000625967 102 ntBASIC2.27□□□□□ -2.05
RPL39P62891 MTND5P19-201ENST00000424872 1794 ntBASIC2.27□□□□□ -2.05
RPL39P62891 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.27□□□□□ -2.05
RPL39P62891 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.27□□□□□ -2.05
RPL39P62891 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RPL39P62891 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RPL39P62891 HSPA8P19-201ENST00000505359 1517 ntBASIC2.27□□□□□ -2.05
RPL39P62891 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RPL39P62891 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RPL39P62891 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.26□□□□□ -2.05
RPL39P62891 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.26□□□□□ -2.05
RPL39P62891 SNORD17-201ENST00000390930 237 ntBASIC2.26□□□□□ -2.05
RPL39P62891 AL049693.1-201ENST00000402760 611 ntBASIC2.26□□□□□ -2.05
RPL39P62891 AL445189.1-201ENST00000405722 338 ntBASIC2.26□□□□□ -2.05
RPL39P62891 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.26□□□□□ -2.05
RPL39P62891 RAB9AP4-201ENST00000415230 609 ntBASIC2.26□□□□□ -2.05
RPL39P62891 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RPL39P62891 RPL7P2-201ENST00000427639 268 ntBASIC2.26□□□□□ -2.05
RPL39P62891 OR2AS1P-201ENST00000427827 319 ntBASIC2.26□□□□□ -2.05
RPL39P62891 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.26□□□□□ -2.05
RPL39P62891 OR9N1P-201ENST00000491296 333 ntBASIC2.26□□□□□ -2.05
RPL39P62891 CDH12P2-201ENST00000504393 298 ntBASIC2.26□□□□□ -2.05
RPL39P62891 AC118282.1-201ENST00000506408 765 ntBASIC2.26□□□□□ -2.05
RPL39P62891 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.26□□□□□ -2.05
RPL39P62891 AC119751.1-201ENST00000513357 765 ntBASIC2.26□□□□□ -2.05
RPL39P62891 RN7SKP18-201ENST00000516005 275 ntBASIC2.26□□□□□ -2.05
RPL39P62891 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC2.26□□□□□ -2.05
RPL39P62891 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.26□□□□□ -2.05
RPL39P62891 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
RPL39P62891 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.26□□□□□ -2.05
RPL39P62891 AL162713.1-201ENST00000604480 262 ntBASIC2.26□□□□□ -2.05
RPL39P62891 AL139041.1-201ENST00000605480 610 ntBASIC2.26□□□□□ -2.05
RPL39P62891 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.26□□□□□ -2.05
RPL39P62891 ZYXP1-201ENST00000617638 118 ntBASIC2.26□□□□□ -2.05
RPL39P62891 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RPL39P62891 AF117829.1-206ENST00000621883 3802 ntBASIC2.26□□□□□ -2.05
RPL39P62891 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
RPL39P62891 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.26□□□□□ -2.05
RPL39P62891 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.26□□□□□ -2.05
RPL39P62891 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
RPL39P62891 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.26□□□□□ -2.05
RPL39P62891 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RPL39P62891 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RPL39P62891 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RPL39P62891 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.25□□□□□ -2.05
RPL39P62891 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.25□□□□□ -2.05
RPL39P62891 AC108206.1-201ENST00000570186 4159 ntBASIC2.25□□□□□ -2.05
RPL39P62891 AC022893.2-201ENST00000564832 3296 ntBASIC2.25□□□□□ -2.05
RPL39P62891 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RPL39P62891 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
RPL39P62891 RNU4-35P-201ENST00000362588 141 ntBASIC2.25□□□□□ -2.05
RPL39P62891 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RPL39P62891 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.25□□□□□ -2.05
RPL39P62891 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.25□□□□□ -2.05
RPL39P62891 RNU6-328P-201ENST00000390887 106 ntBASIC2.25□□□□□ -2.05
RPL39P62891 RN7SKP58-201ENST00000411010 305 ntBASIC2.25□□□□□ -2.05
RPL39P62891 AC069218.2-201ENST00000411665 344 ntBASIC2.25□□□□□ -2.05
RPL39P62891 NDUFB4P5-201ENST00000415445 361 ntBASIC2.25□□□□□ -2.05
RPL39P62891 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.25□□□□□ -2.05
RPL39P62891 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RPL39P62891 RWDD4P2-201ENST00000426392 563 ntBASIC2.25□□□□□ -2.05
RPL39P62891 RPS27AP12-201ENST00000429552 465 ntBASIC2.25□□□□□ -2.05
RPL39P62891 ATP5JP1-201ENST00000431631 322 ntBASIC2.25□□□□□ -2.05
RPL39P62891 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.25□□□□□ -2.05
RPL39P62891 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.25□□□□□ -2.05
RPL39P62891 AC073387.1-201ENST00000453261 709 ntBASIC2.25□□□□□ -2.05
RPL39P62891 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.25□□□□□ -2.05
RPL39P62891 PPIAP21-201ENST00000464473 501 ntBASIC2.25□□□□□ -2.05
RPL39P62891 AC018635.1-201ENST00000468292 1030 ntBASIC2.25□□□□□ -2.05
RPL39P62891 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RPL39P62891 RWDD4P1-201ENST00000488019 565 ntBASIC2.25□□□□□ -2.05
RPL39P62891 RNA5SP228-201ENST00000516232 133 ntBASIC2.25□□□□□ -2.05
RPL39P62891 MIR2116-201ENST00000517221 80 ntBASIC2.25□□□□□ -2.05
RPL39P62891 IGKV2-26-201ENST00000518305 343 ntBASIC2.25□□□□□ -2.05
RPL39P62891 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.25□□□□□ -2.05
RPL39P62891 AC103843.2-201ENST00000530523 682 ntBASIC2.25□□□□□ -2.05
RPL39P62891 OR8R1P-201ENST00000543943 764 ntBASIC2.25□□□□□ -2.05
RPL39P62891 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.25□□□□□ -2.05
RPL39P62891 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC2.25□□□□□ -2.05
RPL39P62891 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.25□□□□□ -2.05
RPL39P62891 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.25□□□□□ -2.05
RPL39P62891 AC006254.3-201ENST00000603353 884 ntBASIC2.25□□□□□ -2.05
RPL39P62891 AC006338.2-201ENST00000616864 791 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms