Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.44□□□□□ -1.7
RPS3AP61247 AC006963.1-201ENST00000624003 1052 ntBASIC4.44□□□□□ -1.7
RPS3AP61247 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.44□□□□□ -1.7
RPS3AP61247 MKKS-204ENST00000639674 192 ntBASIC4.44□□□□□ -1.7
RPS3AP61247 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.44□□□□□ -1.7
RPS3AP61247 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.44□□□□□ -1.7
RPS3AP61247 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RPS3AP61247 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
RPS3AP61247 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPS3AP61247 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPS3AP61247 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RPS3AP61247 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPS3AP61247 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPS3AP61247 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
RPS3AP61247 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPS3AP61247 RNU6-560P-201ENST00000364007 108 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPS3AP61247 MTND4P22-201ENST00000413116 1169 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.43□□□□□ -1.7
RPS3AP61247 RPL31P45-201ENST00000419532 356 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.43□□□□□ -1.7
RPS3AP61247 AC104837.2-201ENST00000427236 424 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.43□□□□□ -1.7
RPS3AP61247 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.43□□□□□ -1.7
RPS3AP61247 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.43□□□□□ -1.7
RPS3AP61247 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPS3AP61247 RPL7P11-201ENST00000437586 658 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 AC011753.3-201ENST00000443436 406 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPS3AP61247 OR52J1P-201ENST00000450596 932 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 RPS3AP53-201ENST00000454716 778 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 AC091685.2-201ENST00000454924 864 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.43□□□□□ -1.7
RPS3AP61247 MTCO3P2-201ENST00000457365 171 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 RPS17P2-201ENST00000461663 408 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 AC010301.1-201ENST00000473936 355 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.43□□□□□ -1.7
RPS3AP61247 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.43□□□□□ -1.7
RPS3AP61247 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.43□□□□□ -1.7
RPS3AP61247 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.43□□□□□ -1.7
RPS3AP61247 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.43□□□□□ -1.7
RPS3AP61247 MTCO1P30-201ENST00000515244 580 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
RPS3AP61247 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.43□□□□□ -1.7
RPS3AP61247 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.43□□□□□ -1.7
RPS3AP61247 MTND4P33-201ENST00000556706 766 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 SULT1C2P1-202ENST00000562418 459 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 AL121834.1-201ENST00000572284 509 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 BNIP3P26-201ENST00000600827 554 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 AC013244.3-201ENST00000605614 388 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 AC092954.1-201ENST00000609121 445 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 AC006386.1-201ENST00000619436 415 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 AP001784.1-201ENST00000624107 428 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.43□□□□□ -1.7
RPS3AP61247 AC073429.2-201ENST00000569694 1444 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.43□□□□□ -1.7
RPS3AP61247 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPS3AP61247 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPS3AP61247 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPS3AP61247 AC087190.4-201ENST00000574616 8334 ntBASIC4.43□□□□□ -1.7
RPS3AP61247 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
RPS3AP61247 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPS3AP61247 KARSP3-201ENST00000571212 1504 ntBASIC4.42□□□□□ -1.7
RPS3AP61247 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPS3AP61247 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPS3AP61247 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPS3AP61247 MIR153-1-201ENST00000384914 90 ntBASIC4.42□□□□□ -1.7
RPS3AP61247 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RPS3AP61247 RNU6-1242P-201ENST00000391052 103 ntBASIC4.42□□□□□ -1.7
RPS3AP61247 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RPS3AP61247 AL133384.1-201ENST00000412744 351 ntBASIC4.42□□□□□ -1.7
RPS3AP61247 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RPS3AP61247 KRR1P1-201ENST00000419430 803 ntBASIC4.42□□□□□ -1.7
RPS3AP61247 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RPS3AP61247 OR51AB1P-201ENST00000429046 620 ntBASIC4.42□□□□□ -1.7
RPS3AP61247 PSMA2P3-201ENST00000429685 675 ntBASIC4.42□□□□□ -1.7
RPS3AP61247 RPL31P54-201ENST00000429803 370 ntBASIC4.42□□□□□ -1.7
RPS3AP61247 AC092162.1-201ENST00000432828 434 ntBASIC4.42□□□□□ -1.7
RPS3AP61247 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
RPS3AP61247 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.42□□□□□ -1.7
RPS3AP61247 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.42□□□□□ -1.7
RPS3AP61247 RPL23AP16-201ENST00000441715 421 ntBASIC4.42□□□□□ -1.7
RPS3AP61247 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.42□□□□□ -1.7
RPS3AP61247 MTCO2P25-201ENST00000447065 681 ntBASIC4.42□□□□□ -1.7
RPS3AP61247 OR1H1P-201ENST00000448731 937 ntBASIC4.42□□□□□ -1.7
RPS3AP61247 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.42□□□□□ -1.7
RPS3AP61247 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.42□□□□□ -1.7
RPS3AP61247 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.42□□□□□ -1.7
RPS3AP61247 BTF3P13-201ENST00000513224 490 ntBASIC4.42□□□□□ -1.7
RPS3AP61247 RN7SKP265-201ENST00000516448 223 ntBASIC4.42□□□□□ -1.7
RPS3AP61247 RNU6-1261P-201ENST00000517194 104 ntBASIC4.42□□□□□ -1.7
RPS3AP61247 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.42□□□□□ -1.7
RPS3AP61247 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.42□□□□□ -1.7
RPS3AP61247 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.42□□□□□ -1.7
RPS3AP61247 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.42□□□□□ -1.7
RPS3AP61247 AC005832.3-201ENST00000537929 631 ntBASIC4.42□□□□□ -1.7
RPS3AP61247 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.42□□□□□ -1.7
RPS3AP61247 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.42□□□□□ -1.7
RPS3AP61247 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms